Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim63Q38HM4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim63Q38HM4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.44□□□□□ -0.26
Trim63Q38HM4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.44□□□□□ -0.26
Trim63Q38HM4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.44□□□□□ -0.26
Trim63Q38HM4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.44□□□□□ -0.26
Trim63Q38HM4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.44□□□□□ -0.26
Trim63Q38HM4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim63Q38HM4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Gm13238-201ENSMUST00000117655 780 ntBASIC13.43□□□□□ -0.26
Trim63Q38HM4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.43□□□□□ -0.26
Trim63Q38HM4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim63Q38HM4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trim63Q38HM4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms