Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CiitaP79621 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CiitaP79621 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CiitaP79621 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CiitaP79621 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CiitaP79621 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.52■□□□□ 0.4
CiitaP79621 Gm11452-201ENSMUST00000122376 690 ntBASIC17.52■□□□□ 0.4
CiitaP79621 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CiitaP79621 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CiitaP79621 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CiitaP79621 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.52■□□□□ 0.4
CiitaP79621 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.52■□□□□ 0.4
CiitaP79621 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.52■□□□□ 0.4
CiitaP79621 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CiitaP79621 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.52■□□□□ 0.39
CiitaP79621 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CiitaP79621 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CiitaP79621 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CiitaP79621 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CiitaP79621 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
CiitaP79621 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.51■□□□□ 0.39
CiitaP79621 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.51■□□□□ 0.39
CiitaP79621 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CiitaP79621 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.5■□□□□ 0.39
CiitaP79621 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Gm7862-201ENSMUST00000121461 292 ntBASIC17.5■□□□□ 0.39
CiitaP79621 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.5■□□□□ 0.39
CiitaP79621 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.5■□□□□ 0.39
CiitaP79621 Gm9172-201ENSMUST00000212092 954 ntBASIC17.5■□□□□ 0.39
CiitaP79621 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CiitaP79621 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CiitaP79621 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CiitaP79621 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CiitaP79621 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CiitaP79621 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CiitaP79621 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CiitaP79621 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CiitaP79621 Gm12497-201ENSMUST00000138778 237 ntBASIC17.49■□□□□ 0.39
CiitaP79621 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CiitaP79621 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CiitaP79621 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CiitaP79621 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.49■□□□□ 0.39
CiitaP79621 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CiitaP79621 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.49■□□□□ 0.39
CiitaP79621 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CiitaP79621 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CiitaP79621 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CiitaP79621 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CiitaP79621 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms