Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.59□□□□□ -0.23
Hmx3P42581 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.59□□□□□ -0.23
Hmx3P42581 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.59□□□□□ -0.23
Hmx3P42581 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.59□□□□□ -0.23
Hmx3P42581 Gm18025-201ENSMUST00000221733 862 ntBASIC13.59□□□□□ -0.23
Hmx3P42581 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hmx3P42581 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.59□□□□□ -0.23
Hmx3P42581 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hmx3P42581 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmx3P42581 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Hmx3P42581 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Hmx3P42581 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmx3P42581 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hmx3P42581 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Hmx3P42581 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Hmx3P42581 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.58□□□□□ -0.24
Hmx3P42581 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.58□□□□□ -0.24
Hmx3P42581 Gm18666-201ENSMUST00000190039 958 ntBASIC13.58□□□□□ -0.24
Hmx3P42581 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.58□□□□□ -0.24
Hmx3P42581 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.58□□□□□ -0.24
Hmx3P42581 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.58□□□□□ -0.24
Hmx3P42581 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hmx3P42581 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.57□□□□□ -0.24
Hmx3P42581 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Hmx3P42581 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.57□□□□□ -0.24
Hmx3P42581 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.57□□□□□ -0.24
Hmx3P42581 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.57□□□□□ -0.24
Hmx3P42581 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.57□□□□□ -0.24
Hmx3P42581 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.57□□□□□ -0.24
Hmx3P42581 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.57□□□□□ -0.24
Hmx3P42581 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.57□□□□□ -0.24
Hmx3P42581 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hmx3P42581 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Phf7-203ENSMUST00000226565 1971 ntBASIC13.56□□□□□ -0.24
Hmx3P42581 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.56□□□□□ -0.24
Hmx3P42581 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.56□□□□□ -0.24
Hmx3P42581 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Hmx3P42581 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmx3P42581 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms