Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.42□□□□□ -0.1
P20040 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.42□□□□□ -0.1
P20040 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.42□□□□□ -0.1
P20040 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.42□□□□□ -0.1
P20040 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.42□□□□□ -0.1
P20040 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
P20040 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.41□□□□□ -0.1
P20040 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
P20040 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
P20040 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Gm10013-201ENSMUST00000106074 672 ntBASIC14.41□□□□□ -0.1
P20040 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Gm18958-201ENSMUST00000174258 762 ntBASIC14.41□□□□□ -0.1
P20040 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Gm18101-201ENSMUST00000215769 548 ntBASIC14.41□□□□□ -0.1
P20040 Gm7370-201ENSMUST00000219471 767 ntBASIC14.41□□□□□ -0.1
P20040 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
P20040 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P20040 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.4□□□□□ -0.1
P20040 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
P20040 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
P20040 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
P20040 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
P20040 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
P20040 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
P20040 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
P20040 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
P20040 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.4□□□□□ -0.1
P20040 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.4□□□□□ -0.1
P20040 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
P20040 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.4□□□□□ -0.1
P20040 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.4□□□□□ -0.1
P20040 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
P20040 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
P20040 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
P20040 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P20040 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
P20040 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.39□□□□□ -0.11
P20040 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
P20040 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
P20040 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
P20040 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.39□□□□□ -0.11
P20040 Gm18032-201ENSMUST00000222541 538 ntBASIC14.39□□□□□ -0.11
P20040 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
P20040 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
P20040 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.39□□□□□ -0.11
P20040 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.39□□□□□ -0.11
P20040 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms