Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Hdac3O88895 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.51□□□□□ -0.09
Hdac3O88895 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.51□□□□□ -0.09
Hdac3O88895 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.51□□□□□ -0.09
Hdac3O88895 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Hdac3O88895 Gm7370-201ENSMUST00000219471 767 ntBASIC14.51□□□□□ -0.09
Hdac3O88895 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.51□□□□□ -0.09
Hdac3O88895 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Hdac3O88895 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hdac3O88895 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Hdac3O88895 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Hdac3O88895 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.5□□□□□ -0.09
Hdac3O88895 Mir1668-201ENSMUST00000184114 107 ntBASIC14.5□□□□□ -0.09
Hdac3O88895 Gm18959-201ENSMUST00000208954 655 ntBASIC14.5□□□□□ -0.09
Hdac3O88895 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.5□□□□□ -0.09
Hdac3O88895 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.5□□□□□ -0.09
Hdac3O88895 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Hdac3O88895 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Hdac3O88895 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Hdac3O88895 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Hdac3O88895 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.49□□□□□ -0.09
Hdac3O88895 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Hdac3O88895 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.49□□□□□ -0.09
Hdac3O88895 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hdac3O88895 Mir5130-201ENSMUST00000175160 84 ntBASIC14.49□□□□□ -0.09
Hdac3O88895 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hdac3O88895 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.49□□□□□ -0.09
Hdac3O88895 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Hdac3O88895 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Hdac3O88895 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Hdac3O88895 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hdac3O88895 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.49□□□□□ -0.09
Hdac3O88895 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Hdac3O88895 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.48□□□□□ -0.09
Hdac3O88895 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Hdac3O88895 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Gm13186-201ENSMUST00000118031 316 ntBASIC14.48□□□□□ -0.09
Hdac3O88895 Gm15565-201ENSMUST00000118890 427 ntBASIC14.48□□□□□ -0.09
Hdac3O88895 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.48□□□□□ -0.09
Hdac3O88895 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.48□□□□□ -0.09
Hdac3O88895 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hdac3O88895 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Hdac3O88895 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Hdac3O88895 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Hdac3O88895 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hdac3O88895 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.47□□□□□ -0.09
Hdac3O88895 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.47□□□□□ -0.09
Hdac3O88895 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hdac3O88895 Actl10-202ENSMUST00000226583 1501 ntBASIC14.47□□□□□ -0.09
Hdac3O88895 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms