Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hcn1O88704 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hcn1O88704 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.54■□□□□ 0.08
Hcn1O88704 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.54■□□□□ 0.08
Hcn1O88704 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.54■□□□□ 0.08
Hcn1O88704 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.54■□□□□ 0.08
Hcn1O88704 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Hcn1O88704 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.54■□□□□ 0.08
Hcn1O88704 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.53■□□□□ 0.08
Hcn1O88704 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Hcn1O88704 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Hcn1O88704 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Hcn1O88704 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Hcn1O88704 Gm26039-201ENSMUST00000158152 144 ntBASIC15.53■□□□□ 0.08
Hcn1O88704 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Hcn1O88704 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Hcn1O88704 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Hcn1O88704 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Hcn1O88704 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Hcn1O88704 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Hcn1O88704 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.52■□□□□ 0.08
Hcn1O88704 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.52■□□□□ 0.08
Hcn1O88704 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.52■□□□□ 0.08
Hcn1O88704 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Hcn1O88704 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hcn1O88704 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Hcn1O88704 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hcn1O88704 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hcn1O88704 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.52■□□□□ 0.07
Hcn1O88704 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hcn1O88704 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Hcn1O88704 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hcn1O88704 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hcn1O88704 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Hcn1O88704 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Hcn1O88704 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Hcn1O88704 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Hcn1O88704 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Hcn1O88704 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hcn1O88704 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Hcn1O88704 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms