Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf17O88472 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf17O88472 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf17O88472 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf17O88472 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf17O88472 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf17O88472 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf17O88472 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.02□□□□□ -0.01
Tnfrsf17O88472 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Gm17968-201ENSMUST00000194902 784 ntBASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf17O88472 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Gm13365-201ENSMUST00000121188 973 ntBASIC15□□□□□ -0.01
Tnfrsf17O88472 Gm25948-201ENSMUST00000175334 112 ntBASIC15□□□□□ -0.01
Tnfrsf17O88472 Gm4899-201ENSMUST00000178708 719 ntBASIC15□□□□□ -0.01
Tnfrsf17O88472 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15□□□□□ -0.01
Tnfrsf17O88472 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15□□□□□ -0.01
Tnfrsf17O88472 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15□□□□□ -0.01
Tnfrsf17O88472 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfrsf17O88472 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Gm12428-201ENSMUST00000119844 727 ntBASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.99□□□□□ -0.01
Tnfrsf17O88472 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms