Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.52■□□□□ 0.24
Banf1O54962 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.52■□□□□ 0.24
Banf1O54962 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.52■□□□□ 0.24
Banf1O54962 Gm30025-201ENSMUST00000218555 728 ntBASIC16.52■□□□□ 0.24
Banf1O54962 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Banf1O54962 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Banf1O54962 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Banf1O54962 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.52■□□□□ 0.24
Banf1O54962 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Banf1O54962 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.52■□□□□ 0.24
Banf1O54962 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Banf1O54962 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Banf1O54962 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Banf1O54962 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Banf1O54962 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Banf1O54962 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Banf1O54962 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Banf1O54962 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.52■□□□□ 0.23
Banf1O54962 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Banf1O54962 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Banf1O54962 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Banf1O54962 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Banf1O54962 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Banf1O54962 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.51■□□□□ 0.23
Banf1O54962 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.51■□□□□ 0.23
Banf1O54962 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.51■□□□□ 0.23
Banf1O54962 Gm13436-201ENSMUST00000120418 567 ntBASIC16.51■□□□□ 0.23
Banf1O54962 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.51■□□□□ 0.23
Banf1O54962 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Banf1O54962 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Banf1O54962 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.5■□□□□ 0.23
Banf1O54962 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Banf1O54962 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Banf1O54962 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Banf1O54962 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Banf1O54962 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.5■□□□□ 0.23
Banf1O54962 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Banf1O54962 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Banf1O54962 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.49■□□□□ 0.23
Banf1O54962 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.49■□□□□ 0.23
Banf1O54962 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.49■□□□□ 0.23
Banf1O54962 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
Banf1O54962 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.49■□□□□ 0.23
Banf1O54962 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Banf1O54962 Gm7213-201ENSMUST00000215977 950 ntBASIC16.49■□□□□ 0.23
Banf1O54962 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Banf1O54962 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Banf1O54962 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Banf1O54962 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Banf1O54962 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms