Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.69□□□□□ -0.38
Tnfsf11O35235 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.68□□□□□ -0.38
Tnfsf11O35235 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Gm37025-201ENSMUST00000195159 829 ntBASIC12.68□□□□□ -0.38
Tnfsf11O35235 Gm18025-201ENSMUST00000221733 862 ntBASIC12.68□□□□□ -0.38
Tnfsf11O35235 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfsf11O35235 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.68□□□□□ -0.38
Tnfsf11O35235 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Dio3-201ENSMUST00000097228 1449 ntBASIC12.68□□□□□ -0.38
Tnfsf11O35235 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf11O35235 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Gm10517-202ENSMUST00000192970 758 ntBASIC12.67□□□□□ -0.38
Tnfsf11O35235 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf11O35235 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.66□□□□□ -0.38
Tnfsf11O35235 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.66□□□□□ -0.38
Tnfsf11O35235 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Gm27000-201ENSMUST00000182943 842 ntBASIC12.66□□□□□ -0.38
Tnfsf11O35235 Gm42545-201ENSMUST00000202755 922 ntBASIC12.66□□□□□ -0.38
Tnfsf11O35235 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms