Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm15375-201ENSMUST00000119510 849 ntBASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9d-4A0A0G2JG37 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9d-4A0A0G2JG37 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms