Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Trav6d-5A0A075B6B9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav6d-5A0A075B6B9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm18284-201ENSMUST00000172604 624 ntBASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-5A0A075B6B9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm27275-201ENSMUST00000184318 272 ntBASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm36967-201ENSMUST00000193814 266 ntBASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-5A0A075B6B9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-5A0A075B6B9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms