Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6n-6A0A075B6B2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6n-6A0A075B6B2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm10517-202ENSMUST00000192970 758 ntBASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6n-6A0A075B6B2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6n-6A0A075B6B2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms