Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Mir6538-201ENSMUST00000183713 110 ntBASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav12-3A0A075B648 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12-3A0A075B648 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12-3A0A075B648 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms