Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Mir3081-201ENSMUST00000175305 84 ntBASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13-1A0A075B644 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Gm27742-201ENSMUST00000184667 60 ntBASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Gm18669-201ENSMUST00000216049 778 ntBASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-1A0A075B644 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms