Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav8-1A0A075B641 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav8-1A0A075B641 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav8-1A0A075B641 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav8-1A0A075B641 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms