Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav4-2A0A075B638 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4-2A0A075B638 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4-2A0A075B638 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms