Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7n-4A0A075B620 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Gm15375-201ENSMUST00000119510 849 ntBASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Gm6365-201ENSMUST00000054711 744 ntBASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7n-4A0A075B620 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav7n-4A0A075B620 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms