Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC007318.2-201ENST00000620999 243 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 PISRT1-201ENST00000626175 531 ntBASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PCDHGA1Q9Y5H4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 Y_RNA.77-201ENST00000362962 107 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-461P-201ENST00000364195 107 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-512P-201ENST00000364438 103 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-248P-201ENST00000410720 107 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 RN7SKP142-201ENST00000411236 328 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AC104850.1-201ENST00000435940 476 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 TRBV12-1-201ENST00000479785 344 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 YWHAEP4-201ENST00000505390 198 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 Y_RNA.695-201ENST00000516715 107 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-703P-201ENST00000516946 107 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AC073544.2-201ENST00000601155 540 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AL590808.1-201ENST00000618696 141 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AL589994.2-201ENST00000621124 579 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 MIR7515-201ENST00000637837 67 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 AC010889.1-201ENST00000566193 2666 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 FARSBP1-201ENST00000435808 1778 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 TEX21P-201ENST00000447107 1476 ntBASIC2.76□□□□□ -1.97
PCDHGA1Q9Y5H4 RNY4P34-201ENST00000364779 95 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORD116-9-201ENST00000384000 95 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORA70B-201ENST00000384210 135 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORD116-2-201ENST00000384274 95 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORD116-3-201ENST00000384287 95 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORD116-7-201ENST00000384404 95 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORD116-5-201ENST00000384462 95 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORD116-6-201ENST00000384711 96 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 MIR34A-201ENST00000385130 110 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 MIR301A-201ENST00000385261 86 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 RPS3AP36-201ENST00000398190 775 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU2-52P-201ENST00000410680 190 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 USP9YP6-201ENST00000413550 854 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 ELOCP4-201ENST00000420090 333 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC093106.2-201ENST00000428212 385 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 MTND4P25-201ENST00000441039 533 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC103975.1-201ENST00000482506 483 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 RPS29P20-201ENST00000489592 171 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC117532.1-201ENST00000514638 323 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC022616.3-201ENST00000523940 148 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC137800.2-201ENST00000574375 120 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 MIR3167-201ENST00000579623 85 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC090578.1-201ENST00000604955 591 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC087752.4-201ENST00000605911 462 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 AC087241.4-201ENST00000612441 480 ntBASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PCDHGA1Q9Y5H4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AC073343.1-201ENST00000328239 651 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU6-188P-201ENST00000364207 107 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 U3.12-201ENST00000364498 214 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 SNORD116-1-201ENST00000384335 95 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 RNU2-49P-201ENST00000410666 184 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 RNA5SP21-201ENST00000410917 96 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 RN7SKP58-201ENST00000411010 305 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AC127391.1-201ENST00000411737 98 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 BMS1P22-201ENST00000414726 313 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AC245054.2-201ENST00000415639 319 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AL353729.1-201ENST00000425044 720 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 Z83846.1-201ENST00000446798 265 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AP000936.2-201ENST00000447151 681 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AL513124.1-201ENST00000450410 614 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 UQCRHP3-201ENST00000451503 251 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 RPL31P3-201ENST00000458430 332 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 UBL5P3-201ENST00000475112 231 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 TRBV1-201ENST00000476502 284 ntBASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHGA1Q9Y5H4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms