Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 RNU6-942P-201ENST00000363002 107 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 Y_RNA.368-201ENST00000365547 113 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 RNU6-1336P-201ENST00000383886 109 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 RNU6-144P-201ENST00000383951 107 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 SNORA51.5-201ENST00000384126 131 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 SNORA36A-201ENST00000384221 132 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 SNORA66-201ENST00000384792 133 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 SNORA79-201ENST00000408376 140 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 RPS26P42-201ENST00000413485 326 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 RPS11P7-201ENST00000442125 465 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 RNU7-141P-201ENST00000459304 62 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 SNORD46.2-201ENST00000516021 102 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 AL031274.2-201ENST00000599419 203 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 AL442128.1-201ENST00000615151 90 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 AC109583.2-201ENST00000617367 129 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 AP005431.1-201ENST00000618479 319 ntBASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
VPS9D1Q9Y2B5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 AC100757.1-201ENST00000616872 1835 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 AL031003.1-201ENST00000404229 172 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 RNU2-50P-201ENST00000410494 143 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 Z85995.1-201ENST00000415547 335 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 CHEK2P5-201ENST00000423877 246 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 AC093331.1-201ENST00000521474 169 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 MIR6886-201ENST00000619864 61 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 CU639417.4-201ENST00000623928 207 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 MTND5P18-201ENST00000445624 1801 ntBASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS9D1Q9Y2B5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 RNU6-727P-201ENST00000363592 107 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 RNU6-454P-201ENST00000364292 107 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 RNU1-140P-201ENST00000365040 165 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 SNORD18B-201ENST00000365659 72 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 SNORA51.10-201ENST00000384418 136 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 MIR450A2-201ENST00000385022 100 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 MIR1302-5-201ENST00000408164 150 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 SNORA11B-201ENST00000408175 129 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 AC099336.2-201ENST00000422457 254 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 MTND6P12-201ENST00000428247 522 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 EEF1B2P6-201ENST00000445713 673 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 AP000705.1-201ENST00000454567 350 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 AC099560.2-201ENST00000457554 255 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 RPS23P7-201ENST00000466210 444 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 SCARNA16.4-201ENST00000516956 187 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 RPL30P11-203ENST00000598995 310 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 U73479.1-201ENST00000618062 168 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 U6.99-201ENST00000637524 83 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 AC022336.2-201ENST00000568966 2538 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 AL359693.1-201ENST00000614959 2407 ntBASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS9D1Q9Y2B5 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms