Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 RNA5SP212-201ENST00000391223 107 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 TPMTP2-201ENST00000414372 726 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 RPL7P34-201ENST00000433316 712 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 MTND2P29-201ENST00000438595 412 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC008379.1-201ENST00000463655 464 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC027575.1-201ENST00000481064 460 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC018868.1-201ENST00000491307 315 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC008834.1-201ENST00000511612 175 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 CYB5AP5-201ENST00000549779 389 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 MTCYBP23-201ENST00000558717 1102 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC022254.1-201ENST00000567857 235 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC103810.8-201ENST00000607347 118 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AC108479.2-201ENST00000617314 601 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 AL357080.1-201ENST00000617394 239 ntBASIC1.41□□□□□ -2.18
VPS29Q9UBQ0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 MIR126-201ENST00000362291 85 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 RNU6-1167P-201ENST00000363227 94 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 RNU1-42P-201ENST00000364033 160 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 RNU6-343P-201ENST00000364709 104 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 SNORD65.1-201ENST00000390889 71 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 PTGES3P2-201ENST00000407942 482 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 MIR1261-201ENST00000408659 82 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AL353621.1-201ENST00000418219 243 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AL353706.1-201ENST00000436728 494 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AC092001.1-201ENST00000453012 261 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AC117522.2-201ENST00000510049 657 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AC121161.1-201ENST00000510606 652 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AP003497.1-201ENST00000528472 562 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AC012213.3-201ENST00000577199 777 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AC009237.15-201ENST00000610252 501 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 AL445264.1-201ENST00000621719 171 ntBASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
VPS29Q9UBQ0 MTND4P21-201ENST00000453886 1357 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AL591034.2-201ENST00000402839 359 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 RPL7P27-201ENST00000403775 720 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 RPL36AP53-201ENST00000432891 316 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AL137159.1-201ENST00000452808 512 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 SNORD13-201ENST00000459299 104 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AC021382.1-201ENST00000483523 359 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AC008628.1-201ENST00000508663 265 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AC093752.1-206ENST00000511823 336 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 LINC00557-201ENST00000563184 1279 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AL713866.2-201ENST00000603579 219 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AC026741.1-201ENST00000605892 482 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AC092953.2-201ENST00000608000 699 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AC008759.3-201ENST00000613300 508 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 AC003001.2-201ENST00000616294 831 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.39□□□□□ -2.19
VPS29Q9UBQ0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 RNU6-707P-201ENST00000364647 95 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 RNU6-1207P-201ENST00000384343 107 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 RNU6-114P-201ENST00000384704 105 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 SNORA67.5-201ENST00000391036 107 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 MIR934-201ENST00000401241 83 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 MTND1P21-201ENST00000412991 285 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 UBE2FP1-201ENST00000416536 447 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 USP9YP24-201ENST00000434374 697 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AL121890.1-201ENST00000435457 205 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 COX7BP2-201ENST00000437976 242 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 ARPC3P5-201ENST00000448802 534 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 YWHAEP4-201ENST00000505390 198 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 RNU6-581P-201ENST00000516214 105 ntBASIC1.38□□□□□ -2.19
VPS29Q9UBQ0 RNU6-703P-201ENST00000516946 107 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms