Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 AC090132.2-201ENST00000615881 347 ntBASIC3.56□□□□□ -1.84
VSX1Q9NZR4 AC244517.12-201ENST00000623581 663 ntBASIC3.56□□□□□ -1.84
VSX1Q9NZR4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.56□□□□□ -1.84
VSX1Q9NZR4 AL669831.3-213ENST00000636676 183 ntBASIC3.56□□□□□ -1.84
VSX1Q9NZR4 AC022336.2-201ENST00000568966 2538 ntBASIC3.56□□□□□ -1.84
VSX1Q9NZR4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VSX1Q9NZR4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 RNU6-50P-201ENST00000362356 103 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 Y_RNA.28-201ENST00000362554 111 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 Y_RNA.145-201ENST00000363527 102 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 RNU6-1040P-201ENST00000383974 107 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 RNU6-639P-201ENST00000384074 107 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 MIR141-201ENST00000384975 95 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 RNU2-3P-201ENST00000410144 191 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 CYCSP33-201ENST00000414485 327 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 VDAC1P3-201ENST00000434069 851 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC026726.1-201ENST00000512859 601 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC026782.1-201ENST00000512952 449 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 RNA5SP468-201ENST00000516782 93 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC009902.1-201ENST00000519351 183 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 TRAV28-201ENST00000557548 323 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 RN7SL600P-201ENST00000581811 299 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AP000654.2-201ENST00000605633 586 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 RNU6-85P-201ENST00000605989 107 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AL591516.1-201ENST00000611326 274 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 MIR378J-201ENST00000611988 109 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AL445567.2-201ENST00000618935 498 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 SNORD39.4-201ENST00000620099 78 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 PLCE1P1-201ENST00000622094 305 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 uc_338.22-201ENST00000622722 187 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC118273.1-201ENST00000525324 3006 ntBASIC3.55□□□□□ -1.84
VSX1Q9NZR4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.55□□□□□ -1.84
VSX1Q9NZR4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 RNU6-310P-201ENST00000384655 107 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AL096701.2-201ENST00000416920 238 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 RPL31P12-201ENST00000422587 358 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 TOMM20P4-201ENST00000427861 435 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 RN7SL860P-201ENST00000473738 223 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC011005.2-201ENST00000487324 359 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC022493.1-201ENST00000492984 337 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC092436.3-201ENST00000511788 257 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC091516.1-201ENST00000549191 703 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 MIR4284-201ENST00000578924 81 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 NUTF2P8-201ENST00000604593 363 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 MIR6868-201ENST00000611215 58 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AL161423.1-201ENST00000613700 262 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 MIR8058-201ENST00000615737 89 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AL591424.2-201ENST00000617023 128 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VSX1Q9NZR4 AC090740.1-201ENST00000623193 2262 ntBASIC3.54□□□□□ -1.84
VSX1Q9NZR4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VSX1Q9NZR4 AC007785.2-201ENST00000598627 1916 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.53□□□□□ -1.84
VSX1Q9NZR4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.53□□□□□ -1.84
VSX1Q9NZR4 RNA5SP399-201ENST00000364003 117 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 RNU6-596P-201ENST00000365395 98 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 SNORA75.6-201ENST00000391318 127 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 Y_RNA.646-201ENST00000410980 101 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.53□□□□□ -1.84
VSX1Q9NZR4 HMGB1P9-201ENST00000429856 646 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 AL627311.1-201ENST00000431514 115 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.53□□□□□ -1.84
VSX1Q9NZR4 SETP5-201ENST00000437270 562 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 Z82210.1-201ENST00000440037 231 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 AL132838.2-201ENST00000492041 314 ntBASIC3.53□□□□□ -1.84
VSX1Q9NZR4 CEACAMP10-202ENST00000495431 496 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms