Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 SEPT14P2-201ENST00000453405 183 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 RNU7-23P-201ENST00000459465 62 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 RPS26P21-201ENST00000475397 348 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AC026801.1-201ENST00000497178 464 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 SEPT14P4-201ENST00000513445 186 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 SNORA31.21-201ENST00000517180 77 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AC025755.1-201ENST00000521306 278 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 FO082796.1-201ENST00000523795 183 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AL162713.1-201ENST00000604480 262 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AL161629.2-201ENST00000615347 275 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 U6atac.1-201ENST00000616025 117 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 AP003122.6-201ENST00000623831 495 ntBASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC6A13Q9NSD5 MTND4P14-201ENST00000435799 1354 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 NACAP2-201ENST00000318548 624 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-1090P-201ENST00000364065 94 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 MIR490-201ENST00000384865 128 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 RPS29P4-201ENST00000414733 161 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AL353729.1-201ENST00000425044 720 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 MTCO1P20-201ENST00000425366 358 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 PRSS3P4-201ENST00000453323 162 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AC022493.1-201ENST00000492984 337 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 RPS27AP10-201ENST00000496103 208 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AC114786.4-201ENST00000508771 728 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 RNA5SP217-201ENST00000515959 91 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 MIR5692A1-201ENST00000580523 69 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 SRGNP1-201ENST00000603392 451 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 MTND4LP5-201ENST00000605152 292 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AC004852.3-201ENST00000614131 326 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AC026585.1-201ENST00000619582 524 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 AC010338.1-201ENST00000621823 717 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 YWHAEP7-203ENST00000622054 312 ntBASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 FER-210ENST00000628534 558 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC6A13Q9NSD5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-371P-201ENST00000364283 108 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 SNORA75B-201ENST00000384053 137 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 MIR578-201ENST00000384828 96 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 SNORA40C-201ENST00000391285 128 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-908P-201ENST00000410160 94 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-193P-201ENST00000410977 107 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AL353705.1-201ENST00000433468 480 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AC000111.3-201ENST00000433478 193 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 CYCSP32-201ENST00000440548 321 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AL360271.2-201ENST00000447710 161 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 RNU7-180P-201ENST00000459240 63 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 MTAPP1-201ENST00000489154 819 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 RPS29P20-201ENST00000489592 171 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AC009901.1-201ENST00000506703 541 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 MTCO3P9-201ENST00000506989 781 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AC008716.1-201ENST00000511084 513 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AC112206.3-201ENST00000514578 389 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 RNU6-572P-201ENST00000516724 80 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 SNORA31.19-201ENST00000517079 126 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AC245166.1-201ENST00000521012 253 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AL137161.1-201ENST00000532231 390 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 MIR2682-201ENST00000580305 110 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 MIR4276-201ENST00000584832 70 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 HMGN2P15-201ENST00000585707 270 ntBASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC6A13Q9NSD5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 AC093831.2-201ENST00000624393 3427 ntBASIC3.03□□□□□ -1.92
SLC6A13Q9NSD5 MIR412-201ENST00000362142 91 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms