Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNA5SP293-201ENST00000410527 113 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 RPS12P24-201ENST00000412619 387 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 MTND3P8-201ENST00000412909 339 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AC009161.1-201ENST00000417306 376 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 ARL5AP1-201ENST00000418991 388 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 BX842559.1-201ENST00000419615 532 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AC093019.1-201ENST00000443135 252 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 UBE2V1P7-201ENST00000446395 340 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 RNU6-329P-201ENST00000459618 107 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AC087588.1-201ENST00000462203 316 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 RN7SL442P-201ENST00000473804 320 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 SCARNA15.2-201ENST00000516409 127 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 RNU7-30P-201ENST00000516835 62 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 OR11H5P-201ENST00000554039 926 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 SCOCP1-201ENST00000554676 349 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 MIR3921-201ENST00000577308 85 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AL670379.4-201ENST00000605279 254 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AL158032.1-201ENST00000605401 106 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AC022893.3-201ENST00000607665 437 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AC090132.2-201ENST00000615881 347 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 AC002546.1-201ENST00000588041 2504 ntBASIC3.53□□□□□ -1.84
USP29Q9HBJ7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.53□□□□□ -1.84
USP29Q9HBJ7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.53□□□□□ -1.85
USP29Q9HBJ7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
USP29Q9HBJ7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
USP29Q9HBJ7 AC121333.1-201ENST00000567488 2709 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.534-201ENST00000384599 112 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 CISD1P1-201ENST00000393907 327 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AL669831.1-202ENST00000428504 417 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 GTF2IP13-201ENST00000438487 386 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 PRPS1P1-201ENST00000445305 876 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AC104058.1-201ENST00000448028 297 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 RNU6-953P-201ENST00000459154 107 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 RPS27P29-201ENST00000463110 252 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 RPL23AP62-201ENST00000463396 453 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.654-201ENST00000497848 106 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 RNU4-49P-201ENST00000516080 140 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 RNU1-61P-201ENST00000516107 151 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 SNORA70.16-201ENST00000516390 95 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AC093331.1-201ENST00000521474 169 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AC011611.1-201ENST00000552179 197 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 MIR4742-201ENST00000581069 85 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AL138889.2-201ENST00000603883 242 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 CTHRC1P1-201ENST00000605383 469 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AC009570.1-201ENST00000609599 745 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 AL356274.2-201ENST00000624379 3752 ntBASIC3.52□□□□□ -1.85
USP29Q9HBJ7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
USP29Q9HBJ7 MTND4P29-201ENST00000503122 1372 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 RNU4-73P-201ENST00000363164 141 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.813-201ENST00000364639 102 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 Y_RNA.373-201ENST00000365600 103 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 SNORA16.2-201ENST00000390991 127 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AL122016.1-201ENST00000403365 367 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 RN7SKP111-201ENST00000410349 271 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 RNA5SP31-201ENST00000411144 127 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 Z85995.1-201ENST00000415547 335 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 RPL27AP8-201ENST00000424277 446 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 MTND4P28-201ENST00000426217 387 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AL591212.2-201ENST00000433923 257 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 RPS24P13-201ENST00000442520 397 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 MRPL50P4-201ENST00000446432 475 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 SNRPGP3-201ENST00000469405 227 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC083904.1-201ENST00000487828 231 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC009901.1-201ENST00000506703 541 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.51□□□□□ -1.85
USP29Q9HBJ7 RN7SKP256-201ENST00000517201 314 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 AC004024.1-201ENST00000549244 247 ntBASIC3.51□□□□□ -1.85
USP29Q9HBJ7 MTCO3P23-201ENST00000561363 289 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms