Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC023141.4-201ENST00000412031 328 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 RPL37P21-201ENST00000435890 276 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 snoU13.23-201ENST00000458863 104 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AC105252.1-201ENST00000503089 286 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AC114786.4-201ENST00000508771 728 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AL353778.1-201ENST00000603149 408 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 AC017037.3-201ENST00000625016 472 ntBASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RPAP3Q9H6T3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.59□□□□□ -2
RPAP3Q9H6T3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 RNU6-1284P-201ENST00000363701 100 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 RPL17P12-201ENST00000413391 526 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 RPS27AP14-201ENST00000422868 454 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 ELOCP14-201ENST00000428070 331 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 AL591806.2-201ENST00000433122 173 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 MTND1P28-201ENST00000435623 950 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 ELOCP7-201ENST00000439968 331 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 RPL26P9-201ENST00000457466 433 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 RPF2P2-201ENST00000504693 896 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 RNU6-1003P-201ENST00000517099 105 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 AC090970.3-201ENST00000612566 866 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 AC008498.1-201ENST00000613012 531 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.58□□□□□ -2
RPAP3Q9H6T3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
RPAP3Q9H6T3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RPAP3Q9H6T3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
RPAP3Q9H6T3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RPAP3Q9H6T3 UBE2L2-201ENST00000254302 429 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 RNY3P13-201ENST00000365542 102 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 SNORA80E-201ENST00000384744 137 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 AL023284.1-201ENST00000403956 276 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 NDUFS5P1-201ENST00000405668 289 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.57□□□□□ -2
RPAP3Q9H6T3 AC093106.2-201ENST00000428212 385 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 SNRPEP9-201ENST00000436794 238 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.57□□□□□ -2
RPAP3Q9H6T3 RNA5SP165-201ENST00000517142 115 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.57□□□□□ -2
RPAP3Q9H6T3 MTND4LP18-201ENST00000526864 291 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 ZNF321P-202ENST00000550843 495 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.57□□□□□ -2
RPAP3Q9H6T3 AC002400.1-201ENST00000569310 726 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.57□□□□□ -2
RPAP3Q9H6T3 KC877982.1-201ENST00000602313 470 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 AC093424.1-201ENST00000604999 338 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 AP000860.1-201ENST00000605250 559 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 AC105129.3-201ENST00000605455 485 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.57□□□□□ -2
RPAP3Q9H6T3 AC068057.2-201ENST00000624047 895 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 PISRT1-201ENST00000626175 531 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.57□□□□□ -2
RPAP3Q9H6T3 AL445523.1-201ENST00000451184 1362 ntBASIC2.57□□□□□ -2
RPAP3Q9H6T3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
RPAP3Q9H6T3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.57□□□□□ -2
RPAP3Q9H6T3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.57□□□□□ -2
RPAP3Q9H6T3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RPAP3Q9H6T3 RNY4P16-201ENST00000364768 94 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 OR5H15-201ENST00000383696 930 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 MORF4L1P6-201ENST00000418771 268 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 MTCYBP39-201ENST00000437562 491 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 RPL22P17-201ENST00000438729 315 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 MTND5P2-201ENST00000442927 1142 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 RPL21P99-201ENST00000480369 423 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 RN7SKP287-201ENST00000516546 266 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 RNU6-201P-201ENST00000517100 61 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.56□□□□□ -2
RPAP3Q9H6T3 AC022634.1-201ENST00000520765 532 ntBASIC2.56□□□□□ -2
RPAP3Q9H6T3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms