Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
DDX47Q9H0S4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DDX47Q9H0S4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
DDX47Q9H0S4 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
DDX47Q9H0S4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
DDX47Q9H0S4 MTND4P27-201ENST00000450813 1354 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 OR5J1P-201ENST00000313544 939 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 RNU6-859P-201ENST00000362728 107 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 SNORA4.3-201ENST00000365564 137 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 RNU6-190P-201ENST00000384154 102 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 RNU6-220P-201ENST00000390919 107 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC005005.2-201ENST00000420779 380 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC007283.2-201ENST00000424739 197 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 MTND5P25-201ENST00000430499 799 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 USP9YP12-201ENST00000450481 570 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 KATNBL1P6-201ENST00000453433 915 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC007182.2-201ENST00000489251 402 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 MTND1P22-201ENST00000510572 951 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 RNU7-51P-201ENST00000516560 62 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 RNU6-572P-201ENST00000516724 80 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 RNU6-1315P-201ENST00000517187 99 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC025755.1-201ENST00000521306 278 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC022878.1-201ENST00000530684 149 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC087241.2-201ENST00000535801 324 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 MIR3199-1-201ENST00000582434 88 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AP002360.4-201ENST00000606980 481 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.52□□□□□ -2.01
DDX47Q9H0S4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.52□□□□□ -2.01
DDX47Q9H0S4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 SNORD56.2-201ENST00000363242 71 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 MIR301A-201ENST00000385261 86 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AL139039.1-201ENST00000401900 692 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AL031577.2-201ENST00000404133 280 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 RNU2-52P-201ENST00000410680 190 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 USP9YP6-201ENST00000413550 854 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 USP9YP27-201ENST00000418455 438 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AL589872.1-201ENST00000426602 288 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 MICF-203ENST00000432679 129 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AC119618.1-201ENST00000434191 222 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 UBE2D3P4-201ENST00000441973 436 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AC025750.2-201ENST00000442609 450 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AP000936.2-201ENST00000447151 681 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AC092001.1-201ENST00000453012 261 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AP001486.1-201ENST00000463339 476 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 MTCO2P29-201ENST00000465212 189 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AC109927.2-201ENST00000506416 303 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 RNU6-581P-201ENST00000516214 105 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 RNA5SP320-201ENST00000516263 124 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AC174048.1-201ENST00000603389 144 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AC092354.1-201ENST00000606057 376 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 MIR6134-201ENST00000617606 109 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 AF246928.1-201ENST00000623768 87 ntBASIC2.51□□□□□ -2.01
DDX47Q9H0S4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
DDX47Q9H0S4 CDC27P3-201ENST00000635418 1910 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 RNU5E-1-201ENST00000362477 120 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 RNU6-19P-201ENST00000384718 107 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 MIR27B-201ENST00000385129 97 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
DDX47Q9H0S4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX47Q9H0S4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX47Q9H0S4 PTGES3P4-201ENST00000426243 356 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AL513328.1-201ENST00000446460 224 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 SNORD109B-201ENST00000458961 67 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 RNU7-26P-201ENST00000458980 63 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 SNORD109A-201ENST00000459128 67 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.5□□□□□ -2.01
DDX47Q9H0S4 RPL23AP45-201ENST00000476406 468 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AL049873.1-201ENST00000480540 376 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AC109486.1-201ENST00000486833 374 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AC023141.11-201ENST00000508864 202 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX47Q9H0S4 SNORA31.19-201ENST00000517079 126 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AC106038.2-201ENST00000520706 568 ntBASIC2.5□□□□□ -2.01
DDX47Q9H0S4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX47Q9H0S4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms