Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RNU6-434P-201ENST00000384376 107 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 UBA52P6-201ENST00000399822 382 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AL162578.1-201ENST00000406202 378 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 RPL21P90-201ENST00000415692 466 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 RPL21P111-201ENST00000418453 477 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 ZNF863P-201ENST00000426746 417 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 HMGB3P11-201ENST00000440127 604 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 MRPS31P2-201ENST00000451581 518 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 HMGN2P7-201ENST00000456186 273 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 RPL21P41-201ENST00000459863 264 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC008885.1-201ENST00000514930 301 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 SNORA20.3-201ENST00000516880 132 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 RNU6-1315P-201ENST00000517187 99 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 MIR548AC-201ENST00000585049 88 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC018638.8-201ENST00000588755 281 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AL451007.1-201ENST00000595491 289 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC110741.2-201ENST00000605278 268 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 Z82243.1-201ENST00000609432 473 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC135507.2-201ENST00000612443 309 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC063943.3-201ENST00000615562 356 ntBASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.43□□□□□ -1.86
PAAF1Q9BRP4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 HSPA8P4-201ENST00000511877 1920 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 ZNF807-201ENST00000328088 1707 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 MTND4P35-201ENST00000604257 1375 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 RNU6-140P-201ENST00000384566 108 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 RNU6-1127P-201ENST00000384580 107 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 Y_RNA.615-201ENST00000410769 117 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 SRIP2-201ENST00000428470 166 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 AC098614.3-201ENST00000438957 440 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 MTND5P20-201ENST00000448677 143 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 RPS15AP27-201ENST00000449183 343 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 AC007547.1-201ENST00000462177 490 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 RPL27AP5-201ENST00000469428 449 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 RPL7P47-201ENST00000497299 556 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 NDUFB4P9-201ENST00000511646 388 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 AC104136.1-201ENST00000512969 394 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 SNORA70.14-201ENST00000516205 110 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 RNA5SP165-201ENST00000517142 115 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 EIF4BP1-201ENST00000554881 351 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 MIR4424-201ENST00000585257 86 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 AC004805.2-201ENST00000605382 482 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 U2.17-201ENST00000611454 95 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 uc_338.25-201ENST00000613756 156 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 AC002076.2-201ENST00000617362 122 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 AC027309.3-201ENST00000623419 351 ntBASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAAF1Q9BRP4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 Y_RNA.72-201ENST00000362894 103 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 RNU5E-4P-201ENST00000364931 120 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 SNORA7.4-201ENST00000384249 137 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 SNORA54-201ENST00000384281 123 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 MIR514A2-201ENST00000385131 88 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 MIR514A3-201ENST00000385132 88 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 RPS4XP3-201ENST00000398541 413 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 RPS4XP7-201ENST00000406274 780 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 RNU2-68P-201ENST00000410878 191 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 SNRPEP4-201ENST00000435815 279 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 RPS24P13-201ENST00000442520 397 ntBASIC3.41□□□□□ -1.86
PAAF1Q9BRP4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms