Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-453P-201ENST00000516819 85 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 Y_RNA.709-201ENST00000516952 92 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 SNORA31.23-201ENST00000517219 133 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
USB1Q9BQ65 AC096996.1-201ENST00000563813 325 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 SNRPGP15-201ENST00000600149 222 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 AC087783.2-201ENST00000605070 562 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 FTX_3.1-201ENST00000610451 147 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 AL021997.2-201ENST00000615674 271 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 AP001340.1-201ENST00000624405 217 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 AC139713.2-214ENST00000642059 1811 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USB1Q9BQ65 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
USB1Q9BQ65 ASNSP1-201ENST00000518311 1939 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
USB1Q9BQ65 AF127577.6-201ENST00000623352 2191 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
USB1Q9BQ65 AC068700.1-201ENST00000565862 3754 ntBASIC5.01□□□□□ -1.61
USB1Q9BQ65 MUC2-202ENST00000613187 4845 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
USB1Q9BQ65 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5□□□□□ -1.61
USB1Q9BQ65 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USB1Q9BQ65 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
USB1Q9BQ65 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USB1Q9BQ65 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USB1Q9BQ65 AL159987.1-201ENST00000347911 293 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 Y_RNA.24-201ENST00000362508 103 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 RNU6-778P-201ENST00000363269 103 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 RNU6-799P-201ENST00000363567 107 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 RNA5SP242-201ENST00000364171 118 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 RNA5SP131-201ENST00000365452 119 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 RNU6-1144P-201ENST00000384247 104 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 Y_RNA.572-201ENST00000384757 98 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 SNORA26.3-201ENST00000391119 136 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 RPL26P27-201ENST00000414397 437 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5□□□□□ -1.61
USB1Q9BQ65 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5□□□□□ -1.61
USB1Q9BQ65 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5□□□□□ -1.61
USB1Q9BQ65 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5□□□□□ -1.61
USB1Q9BQ65 RPL37P4-201ENST00000448908 268 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 AL121914.1-201ENST00000450188 156 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5□□□□□ -1.61
USB1Q9BQ65 RPSAP50-201ENST00000481955 852 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 COX6B1P2-201ENST00000489624 230 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 BX510359.5-201ENST00000515651 304 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 RNU2-56P-201ENST00000516826 190 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 AC115990.1-201ENST00000526957 301 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 AP001328.1-201ENST00000528550 176 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5□□□□□ -1.61
USB1Q9BQ65 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5□□□□□ -1.61
USB1Q9BQ65 AP000769.2-201ENST00000602344 396 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 AL391813.1-201ENST00000603098 260 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
USB1Q9BQ65 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5□□□□□ -1.61
USB1Q9BQ65 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5□□□□□ -1.61
USB1Q9BQ65 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USB1Q9BQ65 AC134026.1-201ENST00000623249 2239 ntBASIC5□□□□□ -1.61
USB1Q9BQ65 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5□□□□□ -1.61
USB1Q9BQ65 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5□□□□□ -1.61
USB1Q9BQ65 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
USB1Q9BQ65 AL592437.2-201ENST00000421655 2434 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USB1Q9BQ65 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USB1Q9BQ65 AC000123.3-201ENST00000624029 4975 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
USB1Q9BQ65 RNU1-62P-201ENST00000362599 164 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 SNORA64.1-201ENST00000362600 132 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 RNA5SP132-201ENST00000364725 118 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 RNU6-407P-201ENST00000365280 104 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 RNU1-73P-201ENST00000383971 164 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 MIR551A-201ENST00000385042 96 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 MIR616-201ENST00000385293 97 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 HMGN2P30-201ENST00000423237 256 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.99□□□□□ -1.61
USB1Q9BQ65 AC138761.5-201ENST00000433967 325 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 AL135790.2-201ENST00000437701 267 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.99□□□□□ -1.61
USB1Q9BQ65 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.99□□□□□ -1.61
USB1Q9BQ65 RPS23P6-201ENST00000466136 431 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 RN7SL583P-201ENST00000475692 287 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 RN7SL346P-201ENST00000491561 294 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.99□□□□□ -1.61
USB1Q9BQ65 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.99□□□□□ -1.61
USB1Q9BQ65 NACAP3-201ENST00000552100 481 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 MIR3176-201ENST00000582210 90 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 AL356575.1-201ENST00000603008 283 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 AC024940.4-201ENST00000605507 246 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 AC005520.5-201ENST00000613926 164 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.99□□□□□ -1.61
USB1Q9BQ65 MIR6715B-201ENST00000637172 77 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 AC079776.5-201ENST00000641920 211 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.99□□□□□ -1.61
USB1Q9BQ65 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms