Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TIMP4Q99727 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TIMP4Q99727 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.49□□□□□ -1.85
TIMP4Q99727 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
TIMP4Q99727 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TIMP4Q99727 RNU6-26P-201ENST00000383985 107 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 RNU6-76P-201ENST00000384060 104 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 U1.1-201ENST00000384101 164 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 RNY1P14-201ENST00000384426 108 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 RNU6-505P-201ENST00000384427 107 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 Y_RNA.557-201ENST00000384680 107 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 RNU6-328P-201ENST00000390887 106 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 SNORA75.6-201ENST00000391318 127 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 Z99755.1-201ENST00000414048 380 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.49□□□□□ -1.85
TIMP4Q99727 USP9YP30-201ENST00000430729 455 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 HMGB1P27-201ENST00000431429 603 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 RPL23AP50-201ENST00000434149 455 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.49□□□□□ -1.85
TIMP4Q99727 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.49□□□□□ -1.85
TIMP4Q99727 AL359672.1-201ENST00000442302 409 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 NOTCH2P1-201ENST00000443481 624 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TIMP4Q99727 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.49□□□□□ -1.85
TIMP4Q99727 AC026801.1-201ENST00000497178 464 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.49□□□□□ -1.85
TIMP4Q99727 AC092436.3-201ENST00000511788 257 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 RNU6-470P-201ENST00000515954 104 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 RN7SKP258-201ENST00000517151 304 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 SNORA31.22-201ENST00000517204 135 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.49□□□□□ -1.85
TIMP4Q99727 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TIMP4Q99727 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.49□□□□□ -1.85
TIMP4Q99727 7SK.7-201ENST00000603504 247 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.49□□□□□ -1.85
TIMP4Q99727 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.49□□□□□ -1.85
TIMP4Q99727 AC005344.1-201ENST00000613391 459 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 AL121772.2-201ENST00000614331 297 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.49□□□□□ -1.85
TIMP4Q99727 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.49□□□□□ -1.85
TIMP4Q99727 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.49□□□□□ -1.85
TIMP4Q99727 AC119674.1-207ENST00000641355 633 ntBASIC3.49□□□□□ -1.85
TIMP4Q99727 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TIMP4Q99727 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.49□□□□□ -1.85
TIMP4Q99727 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TIMP4Q99727 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.49□□□□□ -1.85
TIMP4Q99727 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TIMP4Q99727 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TIMP4Q99727 PRO1804-201ENST00000623780 2050 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
TIMP4Q99727 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
TIMP4Q99727 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
TIMP4Q99727 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TIMP4Q99727 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TIMP4Q99727 AC007685.1-201ENST00000329806 452 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 SNORD62.1-201ENST00000362541 86 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 RNU6-1059P-201ENST00000363752 98 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 RNU6-266P-201ENST00000364225 107 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 Y_RNA.401-201ENST00000383965 117 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 RNU6-356P-201ENST00000384140 107 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TIMP4Q99727 MTCYBP9-201ENST00000431021 303 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 SNRPEP4-201ENST00000435815 279 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.48□□□□□ -1.85
TIMP4Q99727 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.48□□□□□ -1.85
TIMP4Q99727 HMGN2P21-201ENST00000447764 270 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 AL133547.1-201ENST00000448546 220 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 GSTA11P-201ENST00000452866 669 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 RPL21P41-201ENST00000459863 264 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 AC084198.1-201ENST00000477747 402 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 AC078817.1-201ENST00000492623 435 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.48□□□□□ -1.85
TIMP4Q99727 AC022493.2-201ENST00000506122 481 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 SCARNA16.2-201ENST00000516520 172 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 RNA5SP384-201ENST00000516615 116 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.48□□□□□ -1.85
TIMP4Q99727 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.48□□□□□ -1.85
TIMP4Q99727 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.48□□□□□ -1.85
TIMP4Q99727 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.48□□□□□ -1.85
TIMP4Q99727 AL121603.1-201ENST00000553815 142 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.48□□□□□ -1.85
TIMP4Q99727 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.48□□□□□ -1.85
TIMP4Q99727 AC074050.1-201ENST00000563247 211 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 BRDTP1-201ENST00000605735 677 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 HMGN2P28-201ENST00000606102 262 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 AL161423.1-201ENST00000613700 262 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 AL591424.2-201ENST00000617023 128 ntBASIC3.48□□□□□ -1.85
TIMP4Q99727 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
TIMP4Q99727 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
TIMP4Q99727 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TIMP4Q99727 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TIMP4Q99727 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TIMP4Q99727 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.48□□□□□ -1.85
TIMP4Q99727 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TIMP4Q99727 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TIMP4Q99727 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TIMP4Q99727 AC106871.1-201ENST00000568324 3102 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TIMP4Q99727 RNU6-371P-201ENST00000364283 108 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms