Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 AL590664.1-201ENST00000448065 339 ntBASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 MTND4LP30-201ENST00000454092 297 ntBASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 SNORD121B-201ENST00000458838 81 ntBASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 AC025465.3-201ENST00000510570 311 ntBASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 SNORA14.1-201ENST00000516113 141 ntBASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 Y_RNA.715-201ENST00000517082 110 ntBASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 IGKV2D-23-201ENST00000518179 286 ntBASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 HSPE1P20-201ENST00000538133 289 ntBASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 AC096772.1-201ENST00000609146 564 ntBASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CDK5RAP1Q96SZ6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
CDK5RAP1Q96SZ6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 MAPK10-372ENST00000641954 3413 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AC138393.1-203ENST00000327086 343 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.214-201ENST00000364201 112 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 SMIM11P1-201ENST00000369586 178 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-356P-201ENST00000384140 107 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 MIR134-201ENST00000385258 73 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RPS4XP7-201ENST00000406274 780 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RNA5SP306-201ENST00000411087 107 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-55P-201ENST00000411092 107 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RPLP0P7-201ENST00000416050 667 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 PGBD4P6-201ENST00000421501 610 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AL139247.1-201ENST00000422768 325 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AL591419.1-201ENST00000427423 339 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RPL21P112-201ENST00000434403 463 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RPL9P32-201ENST00000464118 620 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 FO393415.2-201ENST00000480085 343 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AC108860.1-201ENST00000484521 383 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-1092P-201ENST00000516955 87 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 RN7SKP234-201ENST00000517173 224 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AC025423.5-201ENST00000550230 219 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AL137100.2-201ENST00000555786 315 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AC106782.4-201ENST00000568264 210 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AL161423.1-201ENST00000613700 262 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 MIR6864-201ENST00000617935 70 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 AL161637.1-201ENST00000622380 412 ntBASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP1Q96SZ6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.48-201ENST00000362710 103 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 Y_RNA.314-201ENST00000365114 102 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 SNORA70E-201ENST00000384492 135 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 MIR1252-201ENST00000408861 65 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 RPS26P56-201ENST00000444468 240 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 OR2AQ1P-201ENST00000451972 200 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 SNORD5.1-201ENST00000458800 75 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU7-187P-201ENST00000458985 68 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 snoU13.7-201ENST00000459220 104 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 AC078817.1-201ENST00000492623 435 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 AP001086.1-201ENST00000494882 321 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 AC135721.1-201ENST00000497954 479 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 AC023141.12-201ENST00000512399 199 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-397P-201ENST00000516226 104 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 RNU6-111P-201ENST00000517179 105 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 RRN3P3-201ENST00000549207 578 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 AC006254.3-201ENST00000603353 884 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 RAC1P9-201ENST00000604990 392 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 AC009570.1-201ENST00000609599 745 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 U2.17-201ENST00000611454 95 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 ZNF962P-201ENST00000443465 3140 ntBASIC4.01□□□□□ -1.77
CDK5RAP1Q96SZ6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4□□□□□ -1.77
CDK5RAP1Q96SZ6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms