Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MIR514A1-201ENST00000385133 98 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC018630.2-202ENST00000422992 927 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 MTCO2P19-201ENST00000427513 598 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 RPS15AP9-201ENST00000439856 381 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 HMGN2P16-201ENST00000456802 261 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 SRRM1P2-201ENST00000464531 1192 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC128713.1-201ENST00000471495 306 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC006483.1-201ENST00000487308 313 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AL049874.1-201ENST00000489560 388 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 HMGB3P15-201ENST00000507326 574 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC105914.1-201ENST00000511798 226 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 RNU2-10P-201ENST00000516375 211 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 RNU6-506P-201ENST00000516553 94 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC093012.1-202ENST00000549403 582 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AL645944.1-201ENST00000603857 493 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AP002360.4-201ENST00000606980 481 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AL158209.2-201ENST00000619266 216 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC068792.1-201ENST00000621354 417 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC124864.2-201ENST00000624736 186 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.42□□□□□ -1.86
SIN3AQ96ST3 MAPK10-322ENST00000641485 4530 ntBASIC3.42□□□□□ -1.86
SIN3AQ96ST3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 OR4G2P-202ENST00000641004 1759 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 RNU6-108P-201ENST00000365558 107 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 MIR558-201ENST00000384920 94 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 RNU4-55P-201ENST00000410731 137 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC093106.2-201ENST00000428212 385 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC073464.1-201ENST00000429823 534 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 C8orf59P1-201ENST00000429930 303 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 RPS15AP28-201ENST00000435088 386 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 MTND1P4-201ENST00000435196 415 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 HMGB1P12-201ENST00000438594 598 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 RPS12P2-201ENST00000439728 269 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 SNORD97-201ENST00000459187 142 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC007182.2-201ENST00000489251 402 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 RNU6-390P-201ENST00000516259 103 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 NRON-201ENST00000517270 370 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 SUB1P2-201ENST00000556401 297 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 TPRKBP2-201ENST00000565969 475 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 MIR3921-201ENST00000577308 85 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AC106900.2-201ENST00000604994 317 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AF250324.2-201ENST00000608299 610 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 OR5H6-203ENST00000642105 978 ntBASIC3.41□□□□□ -1.86
SIN3AQ96ST3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.41□□□□□ -1.86
SIN3AQ96ST3 MTND5P6-201ENST00000422338 1798 ntBASIC3.4□□□□□ -1.86
SIN3AQ96ST3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.4□□□□□ -1.86
SIN3AQ96ST3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.4□□□□□ -1.86
SIN3AQ96ST3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 RNU6-188P-201ENST00000364207 107 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 RNU6-74P-201ENST00000384235 107 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 RNU6-517P-201ENST00000384362 110 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 RN7SKP140-201ENST00000411196 284 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 GPR143P-201ENST00000434155 205 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 HMGB3P12-201ENST00000438745 556 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC092473.1-201ENST00000441098 221 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC104389.3-201ENST00000445629 235 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC020550.1-201ENST00000447385 163 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 RNU7-51P-201ENST00000516560 62 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 RNA5SP468-201ENST00000516782 93 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 RNU6-1092P-201ENST00000516955 87 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC004486.1-201ENST00000546846 233 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC124947.2-202ENST00000552735 133 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC092954.2-201ENST00000609103 430 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 AC090132.2-201ENST00000615881 347 ntBASIC3.4□□□□□ -1.87
SIN3AQ96ST3 MIR6863-201ENST00000636112 90 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms