Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AL118520.1-201ENST00000450770 291 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AL583843.1-201ENST00000456070 346 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 RN7SL132P-201ENST00000478131 296 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AC022493.1-201ENST00000492984 337 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 OR8R1P-201ENST00000543943 764 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 LINC00933-203ENST00000559812 219 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AC007224.1-201ENST00000564410 144 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AC025678.1-201ENST00000567861 338 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AC087499.8-201ENST00000578406 226 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AC004492.1-201ENST00000607036 742 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AF250324.2-201ENST00000608299 610 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 AC092954.2-201ENST00000609103 430 ntBASIC3.07□□□□□ -1.92
NR1H4Q96RI1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1H4Q96RI1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL139276.1-201ENST00000311910 1001 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 RNU6-371P-201ENST00000364283 108 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC068538.1-201ENST00000376856 336 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 SNORA69-201ENST00000383895 132 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 RNU6-166P-201ENST00000384371 107 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 MIR181B1-201ENST00000385240 110 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL606923.1-201ENST00000406616 190 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 RNU6-193P-201ENST00000410977 107 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 RAB28P1-201ENST00000411517 641 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AF274854.1-201ENST00000413236 615 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL031779.1-201ENST00000415663 330 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC096649.2-201ENST00000416186 393 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL627311.1-201ENST00000431514 115 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 HMGN2P10-201ENST00000448085 265 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 NIPA2P5-201ENST00000452282 464 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AP005435.4-201ENST00000529514 284 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL137161.1-201ENST00000532231 390 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC021739.1-201ENST00000559631 174 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL451007.1-201ENST00000595491 289 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 RPL23AP78-201ENST00000599928 470 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL162413.1-201ENST00000603198 110 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC024220.1-201ENST00000603675 484 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC080078.2-201ENST00000603766 501 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AL035413.2-201ENST00000604801 525 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 uc_338.1-201ENST00000612113 180 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 MIR6798-201ENST00000612887 67 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.06□□□□□ -1.92
NR1H4Q96RI1 UCA1.1-201ENST00000620952 75 ntBASIC3.06□□□□□ -1.92
NR1H4Q96RI1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 Y_RNA.9-201ENST00000362354 101 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RNU6-715P-201ENST00000365204 103 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RNU6-434P-201ENST00000384376 107 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RNU6-45P-201ENST00000384471 107 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RNU6-393P-201ENST00000384475 107 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RPL21P75-201ENST00000396599 483 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RPL21P28-201ENST00000401418 483 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AL592114.1-201ENST00000403842 483 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC023141.4-201ENST00000412031 328 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 ATP5JP1-201ENST00000431631 322 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC000111.3-201ENST00000433478 193 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.05□□□□□ -1.92
NR1H4Q96RI1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RPS15AP27-201ENST00000449183 343 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 CACYBPP2-201ENST00000453625 678 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RPL21P39-201ENST00000463605 483 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 AL672167.3-201ENST00000465951 960 ntBASIC3.05□□□□□ -1.92
NR1H4Q96RI1 RPL21P93-201ENST00000480465 489 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms