Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MIR4298-201ENST00000584380 73 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AC007363.1-201ENST00000604736 620 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AC025588.2-201ENST00000604851 466 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AC010678.1-201ENST00000614118 713 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.26□□□□□ -2.05
RPRD1AQ96P16 OR4G3P-201ENST00000633500 913 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 MIR7157-201ENST00000635801 60 ntBASIC2.26□□□□□ -2.05
RPRD1AQ96P16 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RPRD1AQ96P16 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.25□□□□□ -2.05
RPRD1AQ96P16 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.25□□□□□ -2.05
RPRD1AQ96P16 SNORA3A-201ENST00000364113 130 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 SNORA51.11-201ENST00000384442 131 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 RN7SKP192-201ENST00000411291 327 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 DPH3P2-201ENST00000422618 250 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AL022400.1-201ENST00000423946 935 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 NEFMP1-201ENST00000443423 1006 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AC096638.1-201ENST00000444678 216 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 RN7SL429P-201ENST00000479090 223 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 RN7SL489P-201ENST00000486185 223 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 RN7SL327P-201ENST00000488659 223 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.25□□□□□ -2.05
RPRD1AQ96P16 RNU5A-4P-201ENST00000516588 111 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AC023050.2-201ENST00000544968 387 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 MIR3908-201ENST00000579798 126 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 LRRC37A5P-203ENST00000580181 585 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.25□□□□□ -2.05
RPRD1AQ96P16 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AL450336.1-201ENST00000605180 586 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AC090970.3-201ENST00000612566 866 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AC011939.3-201ENST00000613686 466 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AC021755.4-201ENST00000616620 456 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 RN7SL853P-201ENST00000617250 223 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.25□□□□□ -2.05
RPRD1AQ96P16 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
RPRD1AQ96P16 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 U3.40-201ENST00000408706 208 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AL008987.1-201ENST00000415528 237 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AL592045.1-201ENST00000429867 352 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 MTCO1P42-201ENST00000457379 726 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 KLF3P2-201ENST00000465138 268 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 RPL9P6-201ENST00000492764 598 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 MIR514B-201ENST00000516774 80 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 RNU6-1183P-201ENST00000517054 60 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 RPS3AP4-201ENST00000555161 764 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AL031281.1-201ENST00000604049 488 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AC107214.2-201ENST00000608204 634 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AC009090.3-201ENST00000616553 565 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 AL031601.2-202ENST00000622650 282 ntBASIC2.24□□□□□ -2.05
RPRD1AQ96P16 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.24□□□□□ -2.05
RPRD1AQ96P16 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC005336.3-201ENST00000623833 2679 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 RNA5SP125-201ENST00000364843 120 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 Z98749.2-208ENST00000381646 500 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 SNORD23.1-201ENST00000408212 104 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 OR51A5P-201ENST00000415429 942 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 CYCSP48-201ENST00000417124 323 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 WARS2P1-201ENST00000429678 537 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 Z98742.2-201ENST00000431564 187 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 RNU6-581P-201ENST00000516214 105 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC123904.2-201ENST00000548059 300 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 ARL2BPP2-201ENST00000550907 489 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 MIR3146-201ENST00000580367 79 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.23□□□□□ -2.05
RPRD1AQ96P16 MIR4765-201ENST00000585007 77 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 NRBF2P1-201ENST00000587407 859 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 BNIP3P39-201ENST00000601077 554 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 KC877982.1-201ENST00000602313 470 ntBASIC2.23□□□□□ -2.05
RPRD1AQ96P16 AC105148.1-201ENST00000604961 409 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms