Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SMIM11P1-201ENST00000369586 178 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 SNORD70.1-201ENST00000391007 85 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 RNU6-754P-201ENST00000391166 107 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 Y_RNA.594-201ENST00000410373 140 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 RNU6-1050P-201ENST00000410388 107 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 HSPE1P12-201ENST00000412576 301 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 RPLP0P7-201ENST00000416050 667 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AL590632.1-201ENST00000424289 371 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC008267.5-201ENST00000424928 265 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 RPL7P37-201ENST00000425095 738 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AL691449.1-201ENST00000426570 421 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AL451062.2-201ENST00000427515 271 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC007389.2-201ENST00000434630 306 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC006011.1-201ENST00000442758 349 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AL583843.1-201ENST00000456070 346 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 HMGB1P25-201ENST00000468402 607 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 RN7SL432P-201ENST00000484057 298 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 TBCAP3-201ENST00000512475 312 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 SNORA14.1-201ENST00000516113 141 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC009812.2-201ENST00000517657 457 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC100870.1-201ENST00000522035 505 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 HSPE1P5-201ENST00000561489 272 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC106782.4-201ENST00000568264 210 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC120057.2-201ENST00000571520 271 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC104695.3-201ENST00000604052 296 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC018462.2-201ENST00000605375 395 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AC039056.2-201ENST00000622261 511 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.32□□□□□ -1.88
ZNF48Q96MX3 AF117829.1-206ENST00000621883 3802 ntBASIC3.32□□□□□ -1.88
ZNF48Q96MX3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 CDC27P3-201ENST00000635418 1910 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RNU6-379P-201ENST00000363813 104 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RNU6-946P-201ENST00000383878 107 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RNU6-128P-201ENST00000383976 107 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RNU6-637P-201ENST00000384050 107 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 Y_RNA.473-201ENST00000384333 102 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AL669831.1-202ENST00000428504 417 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 TBCAP1-201ENST00000436520 327 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AC010655.1-201ENST00000449336 292 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RNU7-167P-201ENST00000459160 62 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AC104472.2-201ENST00000469035 601 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AC116655.1-201ENST00000508324 901 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RNU6-470P-201ENST00000515954 104 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RNA5SP468-201ENST00000516782 93 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RNU6-699P-201ENST00000517081 110 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AC087854.1-201ENST00000519706 414 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RPL23AP84-201ENST00000571193 464 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 MIR5685-201ENST00000579080 79 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 MIR3941-201ENST00000582572 103 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 SNORD84-203ENST00000584275 78 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AC018889.1-201ENST00000605372 397 ntBASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ZNF48Q96MX3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF48Q96MX3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF48Q96MX3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF48Q96MX3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF48Q96MX3 RNU6-490P-201ENST00000362985 107 ntBASIC3.3□□□□□ -1.88
ZNF48Q96MX3 RNU6-238P-201ENST00000363313 106 ntBASIC3.3□□□□□ -1.88
ZNF48Q96MX3 RNU1-115P-201ENST00000365329 160 ntBASIC3.3□□□□□ -1.88
ZNF48Q96MX3 RNU6-1026P-201ENST00000384465 108 ntBASIC3.3□□□□□ -1.88
ZNF48Q96MX3 RNU1-89P-201ENST00000384592 164 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms