Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC092001.1-201ENST00000453012 261 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 SNRPFP3-201ENST00000457792 225 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC116655.1-201ENST00000508324 901 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 SNORA40.12-201ENST00000516329 111 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RNU6-1178P-201ENST00000516674 107 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC073539.2-201ENST00000597113 165 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AL591516.1-201ENST00000611326 274 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 AC093536.2-201ENST00000565257 1406 ntBASIC2.92□□□□□ -1.94
CMTM3Q96MX0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CMTM3Q96MX0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 MTND4P14-201ENST00000435799 1354 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AC093831.2-201ENST00000624393 3427 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 Y_RNA.255-201ENST00000364581 97 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 RNU1-109P-201ENST00000383960 147 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 RNU6-19P-201ENST00000384718 107 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 MIR34A-201ENST00000385130 110 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 RN7SKP156-201ENST00000410308 342 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 RPL19P1-201ENST00000411635 428 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AL669831.1-202ENST00000428504 417 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 RPL7P54-201ENST00000438336 674 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 GTF2IP13-201ENST00000438487 386 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AC016691.1-201ENST00000441321 413 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AC009296.1-201ENST00000443146 155 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 FDX1P2-201ENST00000450769 375 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 CACYBPP2-201ENST00000453625 678 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 RPL27AP5-201ENST00000469428 449 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AC083798.1-201ENST00000472671 131 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AC009646.1-201ENST00000510455 318 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 RNU6-506P-201ENST00000516553 94 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 OR5AQ1P-201ENST00000527596 927 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 MIR6875-201ENST00000617506 72 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AL356321.1-201ENST00000621360 228 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 AC084035.1-201ENST00000634543 607 ntBASIC2.91□□□□□ -1.94
CMTM3Q96MX0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CMTM3Q96MX0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CMTM3Q96MX0 AL353743.1-202ENST00000431724 1695 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 Y_RNA.3-201ENST00000362331 103 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 SNORA68.1-201ENST00000364537 132 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 RNU6-384P-201ENST00000364900 104 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 RNA5SP283-201ENST00000365604 119 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 SNORA46-201ENST00000384762 135 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 MIR10A-201ENST00000385043 110 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 RNU6-607P-201ENST00000411283 108 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 HMGN2P31-201ENST00000432430 273 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AC115115.1-201ENST00000449927 248 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AC011005.2-201ENST00000487324 359 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 MTCO3P9-201ENST00000506989 781 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 MTND3P25-201ENST00000509243 135 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AC074344.1-201ENST00000512823 224 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 RNU1-86P-201ENST00000516108 154 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 MIR892C-201ENST00000516410 77 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 RNU1-107P-201ENST00000516617 154 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AL137161.1-201ENST00000532231 390 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 HIF1AP1-201ENST00000553642 175 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AC087499.8-201ENST00000578406 226 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AC012119.1-201ENST00000603184 222 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 RMST_4.1-201ENST00000616886 107 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.9□□□□□ -1.95
CMTM3Q96MX0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CMTM3Q96MX0 MTND5P1-201ENST00000445440 1375 ntBASIC2.89□□□□□ -1.95
CMTM3Q96MX0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMTM3Q96MX0 RNU1-100P-201ENST00000365255 165 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms