Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FGD4Q96M96 MTND4P1-201ENST00000457501 1466 ntBASIC4.43□□□□□ -1.7
FGD4Q96M96 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
FGD4Q96M96 Z82217.1-201ENST00000625157 8149 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FGD4Q96M96 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.42□□□□□ -1.7
FGD4Q96M96 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FGD4Q96M96 Y_RNA.333-201ENST00000365274 102 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 MIR23A-201ENST00000385245 73 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 MRPL42P3-201ENST00000401492 326 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 RNU6-985P-201ENST00000410182 104 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.42□□□□□ -1.7
FGD4Q96M96 TOMM22P1-201ENST00000418578 312 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.42□□□□□ -1.7
FGD4Q96M96 NDUFB4P7-201ENST00000423198 363 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 AL591419.1-201ENST00000427423 339 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 USP9YP30-201ENST00000430729 455 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.42□□□□□ -1.7
FGD4Q96M96 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.42□□□□□ -1.7
FGD4Q96M96 AC006517.1-201ENST00000480485 328 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.42□□□□□ -1.7
FGD4Q96M96 AL359273.1-201ENST00000510918 627 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 RNU6-307P-201ENST00000516743 106 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.42□□□□□ -1.7
FGD4Q96M96 ATP5F1P5-201ENST00000526403 760 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.42□□□□□ -1.7
FGD4Q96M96 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.42□□□□□ -1.7
FGD4Q96M96 AL157871.3-201ENST00000557231 293 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 MIR4680-201ENST00000580906 66 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 ELOCP5-201ENST00000604924 333 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 RNU6-85P-201ENST00000605989 107 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.42□□□□□ -1.7
FGD4Q96M96 PNPT1P2-201ENST00000456768 2050 ntBASIC4.42□□□□□ -1.7
FGD4Q96M96 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.42□□□□□ -1.7
FGD4Q96M96 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.42□□□□□ -1.7
FGD4Q96M96 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
FGD4Q96M96 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FGD4Q96M96 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.42□□□□□ -1.7
FGD4Q96M96 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.42□□□□□ -1.7
FGD4Q96M96 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
FGD4Q96M96 AC116096.1-201ENST00000566804 2314 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
FGD4Q96M96 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FGD4Q96M96 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FGD4Q96M96 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FGD4Q96M96 RNU6-512P-201ENST00000364438 103 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 U3.15-201ENST00000365398 212 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 RNU6-395P-201ENST00000365662 106 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 RNU6-1181P-201ENST00000384191 106 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FGD4Q96M96 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
FGD4Q96M96 AL356057.3-201ENST00000402607 340 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 SNORA11.1-201ENST00000408133 129 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 MIR1290-201ENST00000408735 78 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.41□□□□□ -1.7
FGD4Q96M96 AC091390.3-201ENST00000426478 338 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 HMGB1P9-201ENST00000429856 646 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 SNRPEP4-201ENST00000435815 279 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.41□□□□□ -1.7
FGD4Q96M96 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.41□□□□□ -1.7
FGD4Q96M96 NDUFS5P3-201ENST00000450668 321 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.41□□□□□ -1.7
FGD4Q96M96 RPL23AP31-201ENST00000456160 467 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.41□□□□□ -1.7
FGD4Q96M96 AC022493.1-201ENST00000492984 337 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.41□□□□□ -1.7
FGD4Q96M96 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.41□□□□□ -1.7
FGD4Q96M96 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.41□□□□□ -1.7
FGD4Q96M96 MIR3944-201ENST00000581277 108 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 AC005899.2-201ENST00000584353 90 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 MIR3922-201ENST00000585192 84 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.41□□□□□ -1.7
FGD4Q96M96 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.41□□□□□ -1.7
FGD4Q96M96 NUTF2P8-201ENST00000604593 363 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 RNU1-30P-201ENST00000606575 163 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FGD4Q96M96 AL355810.1-201ENST00000614629 552 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 7SK.10-201ENST00000621414 298 ntBASIC4.41□□□□□ -1.7
FGD4Q96M96 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.41□□□□□ -1.7
FGD4Q96M96 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
FGD4Q96M96 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
FGD4Q96M96 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
FGD4Q96M96 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FGD4Q96M96 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.41□□□□□ -1.7
FGD4Q96M96 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FGD4Q96M96 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
FGD4Q96M96 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
FGD4Q96M96 Y_RNA.324-201ENST00000365165 102 ntBASIC4.4□□□□□ -1.71
FGD4Q96M96 Y_RNA.473-201ENST00000384333 102 ntBASIC4.4□□□□□ -1.71
FGD4Q96M96 MIR199A2-201ENST00000385289 110 ntBASIC4.4□□□□□ -1.71
FGD4Q96M96 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FGD4Q96M96 Z85995.1-201ENST00000415547 335 ntBASIC4.4□□□□□ -1.71
FGD4Q96M96 AC097713.2-201ENST00000430199 356 ntBASIC4.4□□□□□ -1.71
FGD4Q96M96 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.4□□□□□ -1.71
FGD4Q96M96 HMGN2P21-201ENST00000447764 270 ntBASIC4.4□□□□□ -1.71
FGD4Q96M96 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.4□□□□□ -1.71
FGD4Q96M96 IGKV2D-23-201ENST00000518179 286 ntBASIC4.4□□□□□ -1.71
FGD4Q96M96 AP003122.3-201ENST00000526316 255 ntBASIC4.4□□□□□ -1.71
FGD4Q96M96 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FGD4Q96M96 AC084851.1-201ENST00000529105 249 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms