Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC097478.2-201ENST00000610572 514 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AC022306.3-201ENST00000619930 550 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 AC010608.3-201ENST00000625048 527 ntBASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PKNOX2Q96KN3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 SNORA4.1-201ENST00000364263 144 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 RNU6-748P-201ENST00000384648 107 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 MIR196B-201ENST00000384852 84 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 MIR561-201ENST00000385216 97 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 RPL21P24-201ENST00000413752 448 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AL354692.1-201ENST00000423044 315 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC063976.3-201ENST00000426849 329 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC084290.1-201ENST00000434995 374 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 SNRPEP9-201ENST00000436794 238 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC108938.1-201ENST00000451204 136 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC010631.1-201ENST00000474150 156 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 UBE2V1P12-201ENST00000503954 474 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 MTCYBP43-201ENST00000513621 740 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 RNA5SP148-201ENST00000516527 94 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC022254.1-201ENST00000567857 235 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC106782.4-201ENST00000568264 210 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC021171.1-201ENST00000603137 706 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 AC097655.1-201ENST00000635075 318 ntBASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.21□□□□□ -2.06
PKNOX2Q96KN3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 MIR126-201ENST00000362291 85 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 MIR19A-201ENST00000384878 82 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 SNORA48.2-201ENST00000390926 124 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 MIR1305-201ENST00000408300 86 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 PIGPP2-201ENST00000411569 458 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AL445669.1-201ENST00000426743 755 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 ELOCP14-201ENST00000428070 331 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AC244035.1-201ENST00000430042 390 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 ELOCP7-201ENST00000439968 331 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 USP9YP15-201ENST00000442391 422 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 MTATP6P30-201ENST00000443540 664 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 FAM103A2P-201ENST00000444122 354 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 ELOCP30-201ENST00000447108 299 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 MTND2P39-201ENST00000457230 764 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 USP9YP25-201ENST00000457708 443 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 FAM206BP-201ENST00000510179 541 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 MTCYBP20-201ENST00000524239 1129 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 VN1R82P-201ENST00000601481 356 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AL391001.1-201ENST00000602747 715 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AL158042.1-201ENST00000605338 460 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 MIR6817-201ENST00000615588 66 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AC009233.1-201ENST00000616477 371 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 AC112204.3-201ENST00000623822 332 ntBASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.2□□□□□ -2.06
PKNOX2Q96KN3 ZNF29P-201ENST00000225587 168 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC062016.1-201ENST00000355719 319 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 RNU6-906P-201ENST00000384700 70 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC010153.1-201ENST00000432862 727 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 MTND1P28-201ENST00000435623 950 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 RNU7-59P-201ENST00000459101 61 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC093012.1-202ENST00000549403 582 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC136618.2-201ENST00000575091 400 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC004805.2-201ENST00000605382 482 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC005000.2-201ENST00000605468 310 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC072039.2-201ENST00000608883 439 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AP000484.1-201ENST00000620067 1252 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AC012150.2-201ENST00000621300 544 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 U2.21-201ENST00000637295 81 ntBASIC2.19□□□□□ -2.06
PKNOX2Q96KN3 RNU6-723P-201ENST00000383973 107 ntBASIC2.18□□□□□ -2.06
PKNOX2Q96KN3 AC019129.1-201ENST00000403786 261 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms