Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 MTND5P30-201ENST00000452896 1731 ntBASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.35□□□□□ -1.71
CHAMP1Q96JM3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 Y_RNA.144-201ENST00000363521 113 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 Y_RNA.459-201ENST00000384251 102 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 RNU6-1105P-201ENST00000384774 107 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AL035666.1-201ENST00000446195 348 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AC133473.1-201ENST00000455173 299 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 MIR2053-201ENST00000459295 91 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 RNU6-976P-201ENST00000516086 111 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 RNU6-927P-201ENST00000516199 100 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AC100830.2-201ENST00000581636 240 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AC018462.2-201ENST00000605375 395 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AC002044.1-201ENST00000606707 158 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHAMP1Q96JM3 AL365440.1-201ENST00000436135 2167 ntBASIC4.34□□□□□ -1.72
CHAMP1Q96JM3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 ZNF285B-201ENST00000561698 1767 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 SNORA75B-201ENST00000384053 137 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 Y_RNA.473-201ENST00000384333 102 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 MIR578-201ENST00000384828 96 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 AL359672.1-201ENST00000442302 409 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 MTND5P22-201ENST00000458380 195 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 RN7SKP295-201ENST00000517264 153 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 RNU6-988P-201ENST00000519081 107 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 AC087854.1-201ENST00000519706 414 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 SNRPGP16-201ENST00000533275 226 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 HSPE1P5-201ENST00000561489 272 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 AL606490.9-201ENST00000603331 271 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 ATP5A1P2-202ENST00000616464 443 ntBASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.33□□□□□ -1.72
CHAMP1Q96JM3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 MTND4P1-201ENST00000457501 1466 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 RNU6-266P-201ENST00000364225 107 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 RNU6-890P-201ENST00000384121 107 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 Y_RNA.463-201ENST00000384271 102 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 Y_RNA.500-201ENST00000384466 111 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 MIR218-2-201ENST00000385006 110 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 MIR708-201ENST00000390708 88 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 Y_RNA.594-201ENST00000410373 140 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 RNU6-1050P-201ENST00000410388 107 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 RPL21P90-201ENST00000415692 466 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AC108032.1-201ENST00000416706 207 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 SNORD5.1-201ENST00000458800 75 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 RPL37P6-201ENST00000460682 294 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 SUMO2P6-201ENST00000505273 288 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 HMGB1P22-201ENST00000505315 124 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AC092436.3-201ENST00000511788 257 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 RNU1-103P-201ENST00000516502 125 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AC026371.1-201ENST00000551867 419 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AL355836.1-201ENST00000555951 870 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AC009229.3-201ENST00000608056 282 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AC133104.2-201ENST00000615272 193 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 AC244205.2-202ENST00000635781 342 ntBASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHAMP1Q96JM3 Z73965.1-201ENST00000623412 2297 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms