Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 RBMY2UP-201ENST00000453474 324 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC007547.1-201ENST00000462177 490 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC091951.2-201ENST00000500762 203 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC110768.1-201ENST00000509222 400 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC046134.1-201ENST00000514454 666 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 Y_RNA.665-201ENST00000516177 98 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 RPL7P20-201ENST00000520308 745 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 MIR3158-1-201ENST00000583596 81 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 MIR3922-201ENST00000585192 84 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 UBE2V2P2-201ENST00000587677 504 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 HSPE1P7-201ENST00000604681 321 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AL357078.3-201ENST00000607528 618 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC092807.2-201ENST00000609367 243 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC093913.1-201ENST00000614178 329 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC104260.1-201ENST00000616660 539 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC006133.1-201ENST00000617106 264 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AL136221.1-201ENST00000621449 509 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AP003400.5-201ENST00000624827 617 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 AC017071.1-201ENST00000564407 2204 ntBASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.82□□□□□ -1.8
CDK5RAP3Q96JB5 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 RNA5SP197-201ENST00000363357 119 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-522P-201ENST00000364497 107 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-767P-201ENST00000384132 107 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 MIR184-201ENST00000384962 84 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 MIR301A-201ENST00000385261 86 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AC012498.1-201ENST00000424037 437 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 Z82210.1-201ENST00000440037 231 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 CECR9-201ENST00000453421 199 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-1208P-201ENST00000459588 107 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 RPL21P41-201ENST00000459863 264 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 FTH1P2-201ENST00000466086 412 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AC009901.1-201ENST00000506703 541 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AL133393.1-201ENST00000603277 287 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 AC009994.1-201ENST00000606889 253 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 Y_RNA.804-201ENST00000615262 101 ntBASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDK5RAP3Q96JB5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 MIR30E-201ENST00000362104 92 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 SNORA16.2-201ENST00000390991 127 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 RN7SKP111-201ENST00000410349 271 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-55P-201ENST00000411092 107 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-954P-201ENST00000411355 107 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AL669831.1-202ENST00000428504 417 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AL512844.2-201ENST00000433990 593 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 GTF2IP13-201ENST00000438487 386 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 RPL7P12-201ENST00000446719 750 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 FABP5P15-201ENST00000453566 214 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AP000852.1-201ENST00000472460 573 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 RPL21P93-201ENST00000480465 489 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AC083904.1-201ENST00000487828 231 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 Y_RNA.654-201ENST00000497848 106 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-875P-201ENST00000516488 106 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-1314P-201ENST00000517139 104 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 RNU6-1315P-201ENST00000517187 99 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AC107953.1-201ENST00000522216 297 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AC092747.3-201ENST00000603769 301 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 AC245389.1-201ENST00000605141 529 ntBASIC3.8□□□□□ -1.8
CDK5RAP3Q96JB5 DUSP12P1-201ENST00000612874 516 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms