Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU1-128P-201ENST00000516704 160 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 COPS8P3-201ENST00000526024 482 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AL442663.2-201ENST00000554385 511 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AC074050.1-201ENST00000563247 211 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AL133255.1-201ENST00000606374 441 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AC002044.1-201ENST00000606707 158 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AL133215.3-201ENST00000609801 448 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AC048347.1-201ENST00000624621 427 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 AL359693.1-201ENST00000614959 2407 ntBASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTHRC1Q96CG8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 Y_RNA.315-201ENST00000365117 102 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 RPL21P17-201ENST00000397467 475 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 HSPE1P26-201ENST00000405341 275 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 MIR1302-11-201ENST00000408051 138 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 MIR1302-9-201ENST00000408365 138 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 MIR1302-10-201ENST00000408734 138 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 RN7SKP158-201ENST00000410453 326 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 RNU2-37P-201ENST00000410695 177 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 RNU6-607P-201ENST00000411283 108 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AC016831.2-201ENST00000417179 352 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 SYF2P2-201ENST00000417620 583 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AL353621.1-201ENST00000418219 243 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 RPS3AP52-201ENST00000435639 297 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 Z82210.1-201ENST00000440037 231 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 CECR9-201ENST00000453421 199 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 RNU7-138P-201ENST00000459479 64 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AC117503.1-201ENST00000472241 394 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AL049830.2-201ENST00000480072 201 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 RPL30P5-201ENST00000494923 336 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 MTND5P5-201ENST00000503764 376 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AP003122.3-201ENST00000526316 255 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AC084851.1-201ENST00000529105 249 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AC026371.1-201ENST00000551867 419 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 FRG2DP-202ENST00000566967 323 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 MIR1302-2-201ENST00000607096 138 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 ATP5A1P2-202ENST00000616464 443 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 AC007742.2-201ENST00000618226 398 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 FAM35BP-202ENST00000497389 3337 ntBASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTHRC1Q96CG8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 MIR412-201ENST00000362142 91 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 Y_RNA.259-201ENST00000364619 101 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 Y_RNA.419-201ENST00000384041 102 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 RNU2-68P-201ENST00000410878 191 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 GOT2P5-201ENST00000433995 546 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 FABP5P14-201ENST00000437273 393 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AL359672.1-201ENST00000442302 409 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC007677.1-201ENST00000445757 515 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 SNORD19B-201ENST00000459623 84 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC104472.2-201ENST00000469035 601 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC022493.1-201ENST00000492984 337 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC026801.1-201ENST00000497178 464 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 MIR892C-201ENST00000516410 77 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 RNU6-1282P-201ENST00000516735 96 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AP005639.2-201ENST00000527592 928 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 TRAV37-201ENST00000553906 342 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AL121821.2-201ENST00000556081 394 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 ZNF192P1-203ENST00000565888 810 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 MIR5047-201ENST00000579212 100 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 LRRC37A5P-203ENST00000580181 585 ntBASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.37□□□□□ -1.87
CTHRC1Q96CG8 NUTF2P8-201ENST00000604593 363 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms