Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MIR124-3-201ENST00000384866 87 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 RNU6-55P-201ENST00000411092 107 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 HMGB3P2-201ENST00000411913 584 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.44□□□□□ -1.7
BRF1Q92994 CYCSP33-201ENST00000414485 327 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.44□□□□□ -1.7
BRF1Q92994 AC243428.1-201ENST00000421099 264 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 UBE2D3P2-201ENST00000424409 445 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF1Q92994 AL451062.2-201ENST00000427515 271 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 AC097713.2-201ENST00000430199 356 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.44□□□□□ -1.7
BRF1Q92994 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.44□□□□□ -1.7
BRF1Q92994 GSTA11P-201ENST00000452866 669 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.44□□□□□ -1.7
BRF1Q92994 RNU7-187P-201ENST00000458985 68 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 AC022493.2-201ENST00000506122 481 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 MLLT10P2-201ENST00000506434 249 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 SNORA31.20-201ENST00000517111 133 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 SNORD116.3-201ENST00000517176 78 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 GNAI2P1-201ENST00000541815 315 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 AC008269.2-201ENST00000561915 1105 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 MIR4697-201ENST00000582977 78 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 RNU6-85P-201ENST00000605989 107 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 AL354798.1-201ENST00000622505 329 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF1Q92994 Z69720.2-201ENST00000624755 279 ntBASIC4.44□□□□□ -1.7
BRF1Q92994 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF1Q92994 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF1Q92994 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF1Q92994 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF1Q92994 Y_RNA.2-201ENST00000362330 96 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 RNA5SP515-201ENST00000364570 118 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 Y_RNA.527-201ENST00000384573 102 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 Y_RNA.557-201ENST00000384680 107 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 RNU2-3P-201ENST00000410144 191 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 HMGB1P9-201ENST00000429856 646 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 HSPD1P21-201ENST00000436541 245 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 RPS29P7-201ENST00000439662 171 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.43□□□□□ -1.7
BRF1Q92994 AC108860.1-201ENST00000484521 383 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 SUMO2P6-201ENST00000505273 288 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 HMGB1P22-201ENST00000505315 124 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 RN7SKP21-201ENST00000516503 220 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.43□□□□□ -1.7
BRF1Q92994 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.43□□□□□ -1.7
BRF1Q92994 MIR4286-201ENST00000580651 93 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.43□□□□□ -1.7
BRF1Q92994 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.43□□□□□ -1.7
BRF1Q92994 VN1R107P-201ENST00000601784 209 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 AC107294.1-201ENST00000609524 467 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 AL360181.4-201ENST00000621752 134 ntBASIC4.43□□□□□ -1.7
BRF1Q92994 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRF1Q92994 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRF1Q92994 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.43□□□□□ -1.7
BRF1Q92994 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRF1Q92994 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRF1Q92994 RNU6-596P-201ENST00000365395 98 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.42□□□□□ -1.7
BRF1Q92994 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
BRF1Q92994 RNU6-842P-201ENST00000384269 107 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 SNORA3.3-201ENST00000408712 125 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.42□□□□□ -1.7
BRF1Q92994 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.42□□□□□ -1.7
BRF1Q92994 AC093151.1-201ENST00000427711 313 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 AC079780.1-201ENST00000428259 207 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 AC108059.2-201ENST00000434626 151 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF1Q92994 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.42□□□□□ -1.7
BRF1Q92994 MTATP8P1-201ENST00000467115 207 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 AC092451.1-201ENST00000480211 153 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF1Q92994 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF1Q92994 RNU6-1315P-201ENST00000517187 99 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF1Q92994 CYCSP30-201ENST00000546447 172 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.42□□□□□ -1.7
BRF1Q92994 MIR3921-201ENST00000577308 85 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRF1Q92994 AC087499.8-201ENST00000578406 226 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 MIR1273C-201ENST00000578669 77 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 NUTF2P8-201ENST00000604593 363 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 RMST_4.1-201ENST00000616886 107 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 U4.1-201ENST00000620349 87 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.42□□□□□ -1.7
BRF1Q92994 Z99571.1-201ENST00000636677 394 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
BRF1Q92994 MAPK10-373ENST00000641983 6772 ntBASIC4.42□□□□□ -1.7
BRF1Q92994 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BRF1Q92994 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRF1Q92994 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRF1Q92994 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.41□□□□□ -1.7
BRF1Q92994 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
BRF1Q92994 RNU6-1059P-201ENST00000363752 98 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 Y_RNA.193-201ENST00000363979 102 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 Y_RNA.455-201ENST00000384230 98 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 MIR517A-201ENST00000385001 87 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 MIR514A1-201ENST00000385133 98 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms