Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.16□□□□□ -1.74
ERCC4Q92889 AL139247.1-201ENST00000422768 325 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.16□□□□□ -1.74
ERCC4Q92889 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ERCC4Q92889 ELOCP24-201ENST00000456370 334 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.16□□□□□ -1.74
ERCC4Q92889 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.16□□□□□ -1.74
ERCC4Q92889 snoU13.24-201ENST00000458998 104 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 RPL21P41-201ENST00000459863 264 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 RN7SL323P-201ENST00000494712 295 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 RNU6-914P-201ENST00000516749 109 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.16□□□□□ -1.74
ERCC4Q92889 AC093331.1-201ENST00000521474 169 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 FAM60BP-201ENST00000578364 658 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 MIR4286-201ENST00000580651 93 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 AL162730.1-201ENST00000605734 292 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 AL355365.1-201ENST00000616480 294 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 AL360181.4-201ENST00000621752 134 ntBASIC4.16□□□□□ -1.74
ERCC4Q92889 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
ERCC4Q92889 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
ERCC4Q92889 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
ERCC4Q92889 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
ERCC4Q92889 AC005183.1-201ENST00000603687 1979 ntBASIC4.15□□□□□ -1.74
ERCC4Q92889 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ERCC4Q92889 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.15□□□□□ -1.75
ERCC4Q92889 RNU6-600P-201ENST00000362524 99 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 Y_RNA.126-201ENST00000363382 111 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 RNU6-45P-201ENST00000384471 107 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 SNAP23P1-201ENST00000433229 246 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.15□□□□□ -1.75
ERCC4Q92889 APOOP4-201ENST00000513530 597 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 RNU6-1045P-201ENST00000516321 107 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 RNU6-1073P-201ENST00000517182 106 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.15□□□□□ -1.75
ERCC4Q92889 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.15□□□□□ -1.75
ERCC4Q92889 AC093227.2-201ENST00000589357 285 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 AL606490.9-201ENST00000603331 271 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 CYP2C61P-201ENST00000604072 290 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 AC099778.2-201ENST00000610904 211 ntBASIC4.15□□□□□ -1.75
ERCC4Q92889 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.15□□□□□ -1.75
ERCC4Q92889 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.15□□□□□ -1.75
ERCC4Q92889 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ERCC4Q92889 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.15□□□□□ -1.75
ERCC4Q92889 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ERCC4Q92889 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.15□□□□□ -1.75
ERCC4Q92889 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ERCC4Q92889 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.15□□□□□ -1.75
ERCC4Q92889 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ERCC4Q92889 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ERCC4Q92889 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ERCC4Q92889 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ERCC4Q92889 Y_RNA.197-201ENST00000364004 102 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 RN7SKP280-201ENST00000364196 304 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 RNU6-593P-201ENST00000364716 112 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 MIR30B-201ENST00000384850 88 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 RNA5SP424-201ENST00000390988 115 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 SNORA75.4-201ENST00000391278 119 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 RPL7P37-201ENST00000425095 738 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 RPL21P66-201ENST00000426566 466 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 NIPA2P5-201ENST00000452282 464 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 RPL37P6-201ENST00000460682 294 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 AC108860.1-201ENST00000484521 383 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 TBCAP3-201ENST00000512475 312 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.14□□□□□ -1.75
ERCC4Q92889 RNU6-327P-201ENST00000516270 127 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.14□□□□□ -1.75
ERCC4Q92889 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.14□□□□□ -1.75
ERCC4Q92889 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.14□□□□□ -1.75
ERCC4Q92889 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.14□□□□□ -1.75
ERCC4Q92889 AC012119.1-201ENST00000603184 222 ntBASIC4.14□□□□□ -1.75
ERCC4Q92889 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.14□□□□□ -1.75
ERCC4Q92889 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ERCC4Q92889 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ERCC4Q92889 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ERCC4Q92889 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ERCC4Q92889 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERCC4Q92889 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ERCC4Q92889 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
ERCC4Q92889 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.13□□□□□ -1.75
ERCC4Q92889 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERCC4Q92889 MTCO1P12-201ENST00000414273 1543 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERCC4Q92889 DEFB108F-201ENST00000344638 222 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 RNU6-562P-201ENST00000362731 107 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 Y_RNA.216-201ENST00000364205 93 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 RNU6-173P-201ENST00000364215 104 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 SNORA63C-201ENST00000364578 129 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 MIR184-201ENST00000384962 84 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 MIR514A1-201ENST00000385133 98 ntBASIC4.13□□□□□ -1.75
ERCC4Q92889 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.13□□□□□ -1.75
ERCC4Q92889 BX842559.1-201ENST00000419615 532 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms