Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 DNAJC8P1-201ENST00000554535 372 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC087481.2-201ENST00000565492 330 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC060771.1-201ENST00000582031 164 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC105224.1-201ENST00000587055 421 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 RNU6-6P-201ENST00000606623 107 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AC006023.2-201ENST00000609916 167 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AL590282.1-201ENST00000610379 1136 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 AL445523.1-201ENST00000451184 1362 ntBASIC1.82□□□□□ -2.12
SHROOM3Q8TF72 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 Y_RNA.112-201ENST00000363250 102 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 RNU6-359P-201ENST00000365466 108 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 Y_RNA.374-201ENST00000365606 101 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 RNU6-878P-201ENST00000384578 110 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 MT-TH-201ENST00000387441 69 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 MTCO2P5-201ENST00000422621 426 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AL645568.3-201ENST00000433683 316 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 HMGB1P31-201ENST00000437242 427 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 RPS23P3-201ENST00000470993 430 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC096751.1-202ENST00000502691 1067 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 HMGB1P22-201ENST00000505315 124 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 SEM1P1-201ENST00000506694 209 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 SNORA25.15-201ENST00000516487 89 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 ZNF321P-202ENST00000550843 495 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 MTCO3P24-201ENST00000572729 782 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 MIR3921-201ENST00000577308 85 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC090615.1-201ENST00000577519 154 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AL353997.4-201ENST00000586196 166 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC008147.4-201ENST00000617570 1204 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 MIR6734-201ENST00000621166 68 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC002550.2-201ENST00000621246 394 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 OR5H6-203ENST00000642105 978 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 RNU5F-6P-201ENST00000362979 116 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 RPS15AP12-201ENST00000419498 388 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AL512286.1-201ENST00000439244 400 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 RPL23AP35-201ENST00000451906 501 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC098826.2-201ENST00000452011 651 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 snoU109.4-201ENST00000458953 143 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 MTCO2P32-201ENST00000514865 403 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 SNORA31.8-201ENST00000516327 108 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 RNU6-1256P-201ENST00000516539 103 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC135279.1-201ENST00000543493 504 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 MIR5697-201ENST00000578045 78 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 OR4K8P-201ENST00000578842 1048 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 MIR544B-201ENST00000582372 78 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 Z99289.3-201ENST00000605586 594 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC027807.2-201ENST00000616099 408 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC095031.1-201ENST00000623685 672 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 AC120349.3-201ENST00000624377 529 ntBASIC1.81□□□□□ -2.12
SHROOM3Q8TF72 RNU6-157P-201ENST00000383957 107 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 MIR1284-201ENST00000408337 120 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 MTCO1P17-201ENST00000411522 491 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 CCDC58P2-201ENST00000417131 366 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 GDI2P2-201ENST00000445131 608 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 ATP5J2P3-201ENST00000451550 258 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 RPL12P25-201ENST00000455592 494 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 MTCO2P6-201ENST00000463134 685 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 AC034222.1-201ENST00000494052 532 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 RPF2P2-201ENST00000504693 896 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 AF131216.2-201ENST00000512316 564 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 RN7SKP40-201ENST00000517211 242 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 AP001804.3-201ENST00000525146 880 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 AC022690.1-201ENST00000526681 550 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 AL356057.1-201ENST00000533798 831 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 NIFKP6-201ENST00000598115 845 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 Z94722.1-201ENST00000604328 474 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 AL360181.4-201ENST00000621752 134 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 AC009268.2-201ENST00000621925 457 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 AC079597.1-201ENST00000624306 508 ntBASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHROOM3Q8TF72 RNU6-462P-201ENST00000362659 105 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 U8.14-201ENST00000390843 143 ntBASIC1.79□□□□□ -2.12
SHROOM3Q8TF72 MTCO3P12-201ENST00000416718 547 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms