Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 RPL21P134-201ENST00000453468 483 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 RPS29P20-201ENST00000489592 171 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AC104581.2-201ENST00000572227 430 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AC069431.2-201ENST00000604149 1099 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AF129408.1-201ENST00000608767 431 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 AC018645.2-201ENST00000609151 472 ntBASIC1.63□□□□□ -2.15
LMX1AQ8TE12 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 RNU6-884P-201ENST00000363889 107 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 RNU6-777P-201ENST00000364265 104 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 SNORD116.1-201ENST00000365628 92 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 SNORA46.1-201ENST00000391069 153 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL139397.2-201ENST00000404529 772 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 RNU2-49P-201ENST00000410666 184 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL451074.3-201ENST00000437709 472 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 SNRPEP7-201ENST00000438350 220 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 MTCO3P45-201ENST00000443036 613 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 RPL12P25-201ENST00000455592 494 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 RNA5SP233-201ENST00000459153 113 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 MEMO1P3-201ENST00000459811 302 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 DYNLL1P5-201ENST00000467158 270 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL160314.1-201ENST00000490836 438 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 RN7SL274P-201ENST00000492268 272 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC109445.1-201ENST00000512356 383 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 SCARNA3-201ENST00000517097 143 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL049838.1-201ENST00000563647 981 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC078899.2-201ENST00000595282 212 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL391813.1-201ENST00000603098 260 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC008121.1-201ENST00000603244 268 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC006270.3-201ENST00000605967 1036 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 SDR42E1P2-201ENST00000614861 481 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AP001486.3-201ENST00000615334 372 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL162373.1-201ENST00000620433 407 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AL049777.1-201ENST00000622740 518 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AP000720.1-201ENST00000625091 483 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC013437.2-201ENST00000639587 677 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 AC004520.1-201ENST00000608362 1413 ntBASIC1.62□□□□□ -2.15
LMX1AQ8TE12 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 RNU6-778P-201ENST00000363269 103 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 Y_RNA.192-201ENST00000363977 102 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 RN7SKP266-201ENST00000410232 287 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 RPS3AP37-201ENST00000419176 745 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 ELOCP14-201ENST00000428070 331 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC007919.1-201ENST00000429380 217 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 ELOCP7-201ENST00000439968 331 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC092473.1-201ENST00000441098 221 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC020550.1-201ENST00000447385 163 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC013267.1-201ENST00000458227 267 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 KLF3P2-201ENST00000465138 268 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 LTV1P1-201ENST00000510683 1237 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 RNU6-927P-201ENST00000516199 100 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 RNU7-193P-201ENST00000516723 65 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 RNU6-840P-201ENST00000517275 65 ntBASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.61□□□□□ -2.15
LMX1AQ8TE12 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms