Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 RNU1-41P-201ENST00000516161 162 ntBASIC1.1□□□□□ -2.23
NUP35Q8NFH5 RNU1-48P-201ENST00000516400 162 ntBASIC1.1□□□□□ -2.23
NUP35Q8NFH5 RNU6-667P-201ENST00000517186 102 ntBASIC1.1□□□□□ -2.23
NUP35Q8NFH5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 AC135279.1-201ENST00000543493 504 ntBASIC1.1□□□□□ -2.23
NUP35Q8NFH5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 AC008269.2-201ENST00000561915 1105 ntBASIC1.1□□□□□ -2.23
NUP35Q8NFH5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 AP001542.2-201ENST00000593141 364 ntBASIC1.1□□□□□ -2.23
NUP35Q8NFH5 BX248123.2-201ENST00000606318 124 ntBASIC1.1□□□□□ -2.23
NUP35Q8NFH5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 MIR1322-201ENST00000638013 71 ntBASIC1.1□□□□□ -2.23
NUP35Q8NFH5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
NUP35Q8NFH5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 Y_RNA.25-201ENST00000362528 102 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 Y_RNA.67-201ENST00000362870 100 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 RNA5SP126-201ENST00000365092 109 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 RNU6-1032P-201ENST00000384100 107 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AC007435.1-201ENST00000421086 415 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 RPL36AP53-201ENST00000432891 316 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 RPS15AP9-201ENST00000439856 381 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 FCF1P6-201ENST00000456841 595 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AMD1P1-201ENST00000457220 922 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 RNU6-250P-201ENST00000516958 103 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 CYCSP27-201ENST00000527643 293 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 OR5B19P-201ENST00000531766 928 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AC079598.5-201ENST00000547460 117 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 NDUFA8P1-201ENST00000605525 367 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AC087045.1-201ENST00000605856 382 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 MIR502-201ENST00000606349 86 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AC019226.1-201ENST00000625666 515 ntBASIC1.09□□□□□ -2.23
NUP35Q8NFH5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.09□□□□□ -2.23
NUP35Q8NFH5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
NUP35Q8NFH5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
NUP35Q8NFH5 RBBP8P1-201ENST00000449447 1844 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 RNU6-549P-201ENST00000384433 107 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 MIR597-201ENST00000384968 97 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 MIR518D-201ENST00000385014 87 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 U8.13-201ENST00000390842 128 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AC244035.1-201ENST00000430042 390 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.08□□□□□ -2.24
NUP35Q8NFH5 RPL7P55-201ENST00000450522 746 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.08□□□□□ -2.24
NUP35Q8NFH5 SSXP1-201ENST00000453640 473 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AC008481.1-201ENST00000463278 396 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.08□□□□□ -2.24
NUP35Q8NFH5 RPL23AP94-201ENST00000512518 302 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 MTND5P13-201ENST00000513046 1079 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AP003497.1-201ENST00000528472 562 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 MRPS36P5-201ENST00000551909 298 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AF038458.1-201ENST00000588406 262 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.08□□□□□ -2.24
NUP35Q8NFH5 AC021646.1-201ENST00000605469 484 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 WWP1P1-201ENST00000466609 2769 ntBASIC1.08□□□□□ -2.24
NUP35Q8NFH5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 SNRPEP3-201ENST00000338402 276 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 MIR23A-201ENST00000385245 73 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AL133475.1-201ENST00000404414 305 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 RNA5SP501-201ENST00000410990 112 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AC127391.1-201ENST00000411737 98 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 BX119904.4-201ENST00000424402 301 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 CR848007.2-201ENST00000424918 787 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 CR769776.1-201ENST00000441254 787 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 RPL37P6-201ENST00000460682 294 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AC117522.2-201ENST00000510049 657 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 SNORA48.9-201ENST00000516419 162 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AK6P1-201ENST00000540219 478 ntBASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.07□□□□□ -2.24
NUP35Q8NFH5 AC138915.2-201ENST00000569776 97 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms