Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 CYCSP32-201ENST00000440548 321 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC125238.1-201ENST00000448842 249 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 MTATP6P7-201ENST00000453315 681 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 MTCO2P30-201ENST00000503662 364 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC118273.2-201ENST00000532092 465 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC023050.3-201ENST00000541142 333 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 OR8R1P-201ENST00000543943 764 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC007224.1-201ENST00000564410 144 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC037471.2-201ENST00000564941 598 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 CYCSP39-201ENST00000565821 309 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 BNIP3P25-201ENST00000596023 559 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 VN1R80P-201ENST00000597126 338 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 RMST_4.1-201ENST00000616886 107 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC103705.1-201ENST00000619013 241 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AP003355.3-201ENST00000623465 114 ntBASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
DNAAF1Q8NEP3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC121333.1-201ENST00000567488 2709 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 Y_RNA.86-201ENST00000363020 111 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 SNORD14B-201ENST00000364533 90 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC138393.2-201ENST00000414742 246 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 ARL5AP1-201ENST00000418991 388 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AL353729.1-201ENST00000425044 720 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 MTATP6P23-201ENST00000440153 476 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AL583843.1-201ENST00000456070 346 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AL590639.1-201ENST00000456484 337 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC087884.1-201ENST00000469738 328 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC011005.2-201ENST00000487324 359 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC018710.1-201ENST00000506509 158 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 RNU6-189P-201ENST00000516120 101 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 RPL7P20-201ENST00000520308 745 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC026333.2-201ENST00000542164 106 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 MIR4697-201ENST00000582977 78 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 HMGN2P15-201ENST00000585707 270 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC024220.1-201ENST00000603675 484 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC092747.3-201ENST00000603769 301 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AL355598.1-201ENST00000604169 202 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 U2.17-201ENST00000611454 95 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 U6.42-201ENST00000618440 107 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AL031601.2-202ENST00000622650 282 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AP003122.6-201ENST00000623831 495 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC100810.6-201ENST00000638068 285 ntBASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.09□□□□□ -1.91
DNAAF1Q8NEP3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
DNAAF1Q8NEP3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.09□□□□□ -1.92
DNAAF1Q8NEP3 MFSD8-233ENST00000641482 4860 ntBASIC3.09□□□□□ -1.92
DNAAF1Q8NEP3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 SNORA14A-201ENST00000364773 135 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 RNU6-658P-201ENST00000384606 106 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 RNA5SP219-201ENST00000390940 113 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 RNU6-876P-201ENST00000391295 104 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 AL162578.1-201ENST00000406202 378 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 RNU4-26P-201ENST00000410270 107 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 RN7SKP263-201ENST00000411194 309 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 AC093578.1-201ENST00000415219 368 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 AC245291.1-201ENST00000419501 328 ntBASIC3.08□□□□□ -1.92
DNAAF1Q8NEP3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms