Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU6-434P-201ENST00000384376 107 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 NDUFB4P5-201ENST00000415445 361 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 NDUFB4P7-201ENST00000423198 363 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AL160275.3-201ENST00000423876 471 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AL121890.1-201ENST00000435457 205 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AC092001.1-201ENST00000453012 261 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 PPP1R2P5-201ENST00000457256 603 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 RPS15AP34-201ENST00000487776 387 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AC083904.1-201ENST00000487828 231 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AC103851.1-201ENST00000506833 274 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 MTCO3P9-201ENST00000506989 781 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 HIGD1AP13-201ENST00000509878 289 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AC112206.3-201ENST00000514578 389 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 Z82243.1-201ENST00000609432 473 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 AP003400.5-201ENST00000624827 617 ntBASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.25□□□□□ -1.73
SMC1BQ8NDV3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 SNORD113-7-201ENST00000363762 77 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 RNU6-831P-201ENST00000384548 107 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 RNU2-71P-201ENST00000411395 189 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 RPL7P10-201ENST00000417407 739 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AL356535.1-201ENST00000440335 398 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 PRPS1P1-201ENST00000445305 876 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AC008264.1-201ENST00000447612 367 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 SNRPGP5-201ENST00000456003 220 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AMD1P1-201ENST00000457220 922 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 U3.44-201ENST00000458938 192 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 RPS20P22-201ENST00000473700 357 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AC104136.1-201ENST00000512969 394 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 RNU6-914P-201ENST00000516749 109 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AC105029.1-201ENST00000520250 669 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 MIR3162-201ENST00000581818 82 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 BNIP3P25-201ENST00000596023 559 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 MIR15A-201ENST00000607334 83 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AC128687.2-201ENST00000609657 566 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AC006023.2-201ENST00000609916 167 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 AL132765.2-201ENST00000610812 351 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 Z83843.1-201ENST00000604070 3685 ntBASIC4.24□□□□□ -1.73
SMC1BQ8NDV3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 RNU6-715P-201ENST00000365204 103 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 RNA5SP219-201ENST00000390940 113 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 EIF4E2P1-201ENST00000393781 255 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 Z98941.1-201ENST00000407764 100 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 SETP5-201ENST00000437270 562 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 AC006445.1-201ENST00000491925 405 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 APOOP4-201ENST00000513530 597 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 AC026464.5-201ENST00000562497 722 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 MIR3941-201ENST00000582572 103 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 AC021646.1-201ENST00000605469 484 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 AC103710.3-201ENST00000608157 948 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 MIR486-1-201ENST00000612171 68 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 AC103705.1-201ENST00000619013 241 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMC1BQ8NDV3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 AC008568.2-201ENST00000623862 2313 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 OR56A5-201ENST00000340110 738 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 RNU6-50P-201ENST00000362356 103 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 RNU6-1167P-201ENST00000363227 94 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 Y_RNA.399-201ENST00000383955 105 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 RNU4-47P-201ENST00000410876 114 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 RHEBP3-201ENST00000411920 351 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 BX682237.1-201ENST00000415016 335 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 NDUFA5P4-201ENST00000436704 385 ntBASIC4.22□□□□□ -1.73
SMC1BQ8NDV3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms