Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRT78Q8N1N4 CEP170P1-201ENST00000502249 4587 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 Y_RNA.157-201ENST00000363638 102 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 RNU4-20P-201ENST00000365601 151 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 RNA5SP219-201ENST00000390940 113 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AL645937.1-202ENST00000421799 937 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 HMGB1P9-201ENST00000429856 646 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AL583843.1-201ENST00000456070 346 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 RN7SL93P-201ENST00000463035 293 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AP002884.2-201ENST00000471647 395 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AC096576.1-201ENST00000489014 359 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AC022493.1-201ENST00000492984 337 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 RN7SKP21-201ENST00000516503 220 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 SNORD59.2-201ENST00000516873 68 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AC009902.1-201ENST00000519351 183 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AC078814.3-201ENST00000553036 491 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AL121821.2-201ENST00000556081 394 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 MIR3160-1-201ENST00000577972 85 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 MIR5685-201ENST00000579080 79 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AC092747.3-201ENST00000603769 301 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 AC100810.6-201ENST00000638068 285 ntBASIC3.6□□□□□ -1.83
KRT78Q8N1N4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRT78Q8N1N4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 MIR34A-201ENST00000385130 110 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 SNORA16.2-201ENST00000390991 127 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RPL32P23-201ENST00000397237 405 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RPL5P18-201ENST00000406671 891 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RN7SKP156-201ENST00000410308 342 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 MTCO2P12-201ENST00000427426 682 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AL669831.1-202ENST00000428504 417 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 GTF2IP13-201ENST00000438487 386 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RPS29P7-201ENST00000439662 171 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 MTCYBP6-201ENST00000441810 138 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AL360271.2-201ENST00000447710 161 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 MTATP6P7-201ENST00000453315 681 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RN7SL330P-201ENST00000469709 307 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 Y_RNA.654-201ENST00000497848 106 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AC009901.1-201ENST00000506703 541 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 FGF7P4-201ENST00000509595 295 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RNU2-69P-201ENST00000516061 100 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RNU6-189P-201ENST00000516120 101 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RN7SKP83-201ENST00000516512 178 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 SCARNA14-201ENST00000516903 136 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 TRAV37-201ENST00000553906 342 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AL391261.3-201ENST00000557194 520 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 RN7SL703P-201ENST00000578485 302 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 MIR3941-201ENST00000582572 103 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 VN1R85P-201ENST00000601587 426 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AL132765.2-201ENST00000610812 351 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 AC093913.1-201ENST00000614178 329 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRT78Q8N1N4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 SRP72P2-201ENST00000344851 1979 ntBASIC3.59□□□□□ -1.83
KRT78Q8N1N4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
KRT78Q8N1N4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
KRT78Q8N1N4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
KRT78Q8N1N4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.58□□□□□ -1.84
KRT78Q8N1N4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRT78Q8N1N4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.58□□□□□ -1.84
KRT78Q8N1N4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRT78Q8N1N4 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
KRT78Q8N1N4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRT78Q8N1N4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.58□□□□□ -1.84
KRT78Q8N1N4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRT78Q8N1N4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRT78Q8N1N4 Y_RNA.132-201ENST00000363421 102 ntBASIC3.58□□□□□ -1.84
KRT78Q8N1N4 Y_RNA.138-201ENST00000363462 102 ntBASIC3.58□□□□□ -1.84
KRT78Q8N1N4 SNORD81.2-201ENST00000365153 76 ntBASIC3.58□□□□□ -1.84
KRT78Q8N1N4 RNU1-64P-201ENST00000365443 163 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms