Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-641P-201ENST00000384006 107 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 RNU6-1035P-201ENST00000384477 107 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 RNU6-140P-201ENST00000384566 108 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 DEFB108C-201ENST00000400154 252 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AL139397.2-201ENST00000404529 772 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 CDK8P2-201ENST00000415020 547 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 ZNF90P2-204ENST00000419323 1075 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AL139413.1-201ENST00000421309 217 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 MYL8P-204ENST00000431574 518 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 UBBP3-201ENST00000445497 241 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AL136380.1-201ENST00000447970 162 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AC128713.1-201ENST00000471495 306 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AC087883.1-201ENST00000551882 391 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AC068135.2-201ENST00000569293 1028 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AC020895.1-201ENST00000595362 272 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AC098826.3-201ENST00000603823 466 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AP002360.4-201ENST00000606980 481 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AC009509.4-201ENST00000619202 509 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 U4.3-201ENST00000621047 82 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 AC110079.1-202ENST00000635213 138 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 CR848007.1-201ENST00000442354 1699 ntBASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC60Q8IWA6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC099654.7-201ENST00000635788 2127 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 RNU6-198P-201ENST00000384258 104 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 RNU6-301P-201ENST00000384277 107 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC099548.1-201ENST00000421443 426 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC092047.1-201ENST00000424997 240 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AL358934.1-201ENST00000432346 324 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 HMGB3P12-201ENST00000438745 556 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 RPL12P25-201ENST00000455592 494 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC092798.1-201ENST00000458542 409 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC087588.1-201ENST00000462203 316 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC105252.1-201ENST00000503089 286 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 SCARNA24.1-201ENST00000516465 137 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 RPS3AP4-201ENST00000555161 764 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 HMGB1P14-201ENST00000557424 591 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AMZ2P1-203ENST00000565833 850 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 MIR4298-201ENST00000584380 73 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC008739.2-201ENST00000597006 317 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 RPL23AP78-201ENST00000599928 470 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC245014.2-201ENST00000603689 287 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC136601.2-201ENST00000604356 474 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AL161798.1-201ENST00000604630 131 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC246785.4-201ENST00000605374 287 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC109347.2-201ENST00000610220 349 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC034102.8-201ENST00000615146 484 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC002064.3-201ENST00000623448 346 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 AC092656.1-203ENST00000624134 423 ntBASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC60Q8IWA6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 RNA5SP289-201ENST00000362332 137 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 RNU6-169P-201ENST00000365336 107 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 RNU6-946P-201ENST00000383878 107 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 RNU6-14P-201ENST00000384630 106 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AL445529.1-201ENST00000398713 389 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 FABP5P13-201ENST00000452144 328 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 CECR9-201ENST00000453421 199 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 TPT1P7-201ENST00000458300 517 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AC007182.2-201ENST00000489251 402 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 RN7SKP298-201ENST00000515950 94 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 SNORA31.3-201ENST00000516029 96 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 RNU6-430P-201ENST00000517078 107 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 MTND1P15-201ENST00000579262 949 ntBASIC2.79□□□□□ -1.96
CCDC60Q8IWA6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms