Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC068446.3-201ENST00000555285 382 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 AC067852.3-201ENST00000589177 561 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 MIR8062-201ENST00000621515 85 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 AC243312.2-201ENST00000623340 601 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.68□□□□□ -1.82
VRK3Q8IV63 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VRK3Q8IV63 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VRK3Q8IV63 FAM35DP-201ENST00000323387 2712 ntBASIC3.68□□□□□ -1.82
VRK3Q8IV63 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VRK3Q8IV63 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VRK3Q8IV63 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VRK3Q8IV63 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VRK3Q8IV63 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VRK3Q8IV63 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 PABPC1P7-201ENST00000413177 1513 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 RNU6-214P-201ENST00000384130 107 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 Y_RNA.447-201ENST00000384184 113 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 Y_RNA.512-201ENST00000384518 102 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 MT-TC-201ENST00000387405 66 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 MIR1252-201ENST00000408861 65 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 RNU2-64P-201ENST00000411315 191 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 SUMO1P3-201ENST00000439961 304 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC008264.1-201ENST00000447612 367 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 FABP5P13-201ENST00000452144 328 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 PCNPP5-201ENST00000452246 481 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 RPL21P103-201ENST00000479921 488 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC068781.1-201ENST00000488231 618 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 SLC25A15P5-201ENST00000508033 253 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 RN7SKP82-201ENST00000516786 223 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC008011.1-201ENST00000545989 227 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 AL360157.1-201ENST00000565962 87 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 MIR4716-201ENST00000579628 84 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC244505.7-201ENST00000599675 272 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC104763.2-201ENST00000604179 382 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 Z98751.3-201ENST00000604447 521 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 AL034351.1-201ENST00000605288 668 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 RNU1-30P-201ENST00000606575 163 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 AL365434.2-201ENST00000607979 234 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 AC005344.1-201ENST00000613391 459 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VRK3Q8IV63 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VRK3Q8IV63 MFSD8-236ENST00000641509 4050 ntBASIC3.67□□□□□ -1.82
VRK3Q8IV63 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VRK3Q8IV63 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VRK3Q8IV63 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VRK3Q8IV63 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.66□□□□□ -1.82
VRK3Q8IV63 MTND5P7-201ENST00000413558 1798 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
VRK3Q8IV63 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VRK3Q8IV63 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VRK3Q8IV63 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
VRK3Q8IV63 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VRK3Q8IV63 Y_RNA.152-201ENST00000363578 100 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RNU6-371P-201ENST00000364283 108 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RNU6-450P-201ENST00000364654 107 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 Y_RNA.396-201ENST00000383949 103 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RNU6-472P-201ENST00000384299 107 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RNU6-45P-201ENST00000384471 107 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 MIR135A2-201ENST00000384854 100 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VRK3Q8IV63 AC110754.1-201ENST00000399740 601 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RNA5SP111-201ENST00000411386 101 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 AC092447.6-201ENST00000414578 210 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 UBE2V1P4-201ENST00000425374 344 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.66□□□□□ -1.82
VRK3Q8IV63 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 AL445584.1-201ENST00000431451 330 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 CYCSP43-201ENST00000438233 310 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.66□□□□□ -1.82
VRK3Q8IV63 AL353752.1-201ENST00000454946 260 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 CEACAMP4-201ENST00000457676 421 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 AL133162.1-201ENST00000463228 453 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RPS23P3-201ENST00000470993 430 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 S100A11P1-201ENST00000477525 312 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RN7SL132P-201ENST00000478131 296 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RPL31P60-201ENST00000478450 367 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 AC009901.1-201ENST00000506703 541 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 AC020593.1-201ENST00000507399 299 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RNA5SP164-201ENST00000516533 110 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 RN7SKP60-201ENST00000516985 239 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 ERHP1-201ENST00000523006 310 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.66□□□□□ -1.82
VRK3Q8IV63 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.66□□□□□ -1.82
VRK3Q8IV63 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.66□□□□□ -1.82
VRK3Q8IV63 MIR486-1-201ENST00000612171 68 ntBASIC3.66□□□□□ -1.82
VRK3Q8IV63 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms