Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 RNA5SP124-201ENST00000362739 110 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 Y_RNA.144-201ENST00000363521 113 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 RNU6-596P-201ENST00000365395 98 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 MCFD2P1-201ENST00000417812 300 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 USP9YP30-201ENST00000430729 455 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 RANP8-201ENST00000444720 713 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 RPL7P42-201ENST00000481005 679 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 RPL21P13-201ENST00000488305 481 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 AC025554.1-201ENST00000505641 188 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 RNU6-1256P-201ENST00000516539 103 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 AC004024.1-201ENST00000549244 247 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 AC090132.2-201ENST00000615881 347 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 SNORD39.4-201ENST00000620099 78 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 ZNF962P-201ENST00000443465 3140 ntBASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RUFY4Q6ZNE9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AC008568.2-201ENST00000623862 2313 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 SNORA70.4-201ENST00000365509 134 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 RNU6-213P-201ENST00000384051 104 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 RNU6-1025P-201ENST00000410629 104 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 DAP3P1-201ENST00000441522 278 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AL500522.2-201ENST00000448562 343 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AL135752.1-201ENST00000479477 471 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AC023141.12-201ENST00000512399 199 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 PTP4A1P4-201ENST00000512479 322 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AL360157.1-201ENST00000565962 87 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AC064801.1-201ENST00000612025 407 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 AL354798.1-201ENST00000622505 329 ntBASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.48□□□□□ -1.69
RUFY4Q6ZNE9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 Y_RNA.133-201ENST00000363428 110 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 SNORD46.1-201ENST00000364139 104 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 RNU1-115P-201ENST00000365329 160 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 MIR449B-201ENST00000384995 97 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 MIR517A-201ENST00000385001 87 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AL096701.2-201ENST00000416920 238 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AL358176.2-201ENST00000425769 204 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 GOT2P5-201ENST00000433995 546 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 PCMTD1P1-201ENST00000455560 355 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 RNU7-187P-201ENST00000458985 68 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 RPL7P5-201ENST00000471472 736 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 RPL31P13-201ENST00000484151 370 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 SNORA70.16-201ENST00000516390 95 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 RNU6-1073P-201ENST00000517182 106 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AC025627.2-201ENST00000576220 160 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AL160281.1-201ENST00000605307 311 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AL121772.2-201ENST00000614331 297 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 CR392039.5-201ENST00000623201 510 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AC012442.3-202ENST00000636742 206 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 AC106871.1-201ENST00000568324 3102 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 PNPT1P2-201ENST00000456768 2050 ntBASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUFY4Q6ZNE9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RUFY4Q6ZNE9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.46□□□□□ -1.69
RUFY4Q6ZNE9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 SNORA60-201ENST00000362396 134 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 Y_RNA.80-201ENST00000362996 102 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-463P-201ENST00000384340 107 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 RNU6-1106P-201ENST00000390845 107 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 AL445529.1-201ENST00000398713 389 ntBASIC4.46□□□□□ -1.7
RUFY4Q6ZNE9 MRPL42P3-201ENST00000401492 326 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms